RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CCSMST1Q4G0I0 132 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 HSP90B2PQ58FF3 399 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 FBXO48Q5FWF7 155 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 PLEKHS1Q5SXH7 462 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 METRNLQ641Q3 311 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 LRRC8EQ6NSJ5 796 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 DHRS13Q6UX07 377 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 TAF8Q7Z7C8 310 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CLEC14AQ86T13 490 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 IQCHQ86VS3 1027 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 GATAD2AQ86YP4 633 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 DCP2Q8IU60 420 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 MYO1HQ8N1T3 1032 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 GALNT15Q8N3T1 639 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 OXR1Q8N573 874 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 NKAPQ8N5F7 415 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 HM13Q8TCT9 377 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 ASZ1Q8WWH4 475 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 PATE1Q8WXA2 126 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 JPH3Q8WXH2 748 aaPredicted RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 TMEM159Q96B96 161 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 MOCOSQ96EN8 888 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CRELD1Q96HD1 420 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 APOPT1Q96IL0 206 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 RMDN2Q96LZ7 410 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 BBC3Q96PG8 261 aaPredicted RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 PAIP2Q9BPZ3 127 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 TIMM29Q9BSF4 260 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 LRRC61Q9BV99 259 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 STMN4Q9H169 189 aaPredicted RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 POPDC3Q9HBV1 291 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 UTP6Q9NYH9 597 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 SIRPGQ9P1W8 387 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 TBC1D29Q9UFV1 150 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 EMCNQ9ULC0 261 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 DNMT3AQ9Y6K1 912 aaPredicted RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 DGKBQ9Y6T7 804 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 PTPRBP23467 1997 aa8.15□□□□□ -1.11
GPC3-203ENST00000406757 LRP4O75096 1905 aa8.15□□□□□ -1.11
GPC3-203ENST00000406757 C17orf113A0A1B0GUU1 675 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 TMEM120BA0PK00 339 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 NEMP2A6NFY4 417 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 NCF1BA6NI72 391 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 OR52A4PA6NMU1 304 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 NCF1CA8MVU1 366 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 HMGB1P1B2RPK0 211 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 GPR89AB7ZAQ6 455 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 H3BM21 787 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 LIN7AO14910 233 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 KPNA5O15131 536 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FFAR2O15552 330 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 TYROBPO43914 113 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 SLCO2B1O94956 709 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 SBK3P0C264 359 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 GPR89BP0CG08 455 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 NCF1P14598 390 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 NME1P15531 152 aaKnown RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 CD9P21926 228 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 IDSP22304 550 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 OAS2P29728 719 aaKnown RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 CRHR1P34998 444 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 CCT5P48643 541 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 RGS4P49798 205 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 GYS2P54840 703 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 CLDN6P56747 220 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 OVGP1Q12889 678 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 ILF3Q12906 894 aaKnown RBP eCLIP8.14□□□□□ -1.118e-7■■■■□ 21.8
GPC3-203ENST00000406757 PRKG2Q13237 762 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 GBX1Q14549 363 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 PHKG1Q16816 387 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 DEFB133Q30KQ1 61 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 C18orf21Q32NC0 220 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 MBOAT1Q6ZNC8 495 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 UBE2R2Q712K3 238 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 ISCA2Q86U28 154 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 SLC22A15Q8IZD6 547 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FSTL5Q8N475 847 aaPredicted RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 CCDC63Q8NA47 563 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FAM46DQ8NEK8 389 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 GPBAR1Q8TDU6 330 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 DLG3Q92796 817 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 SKA1Q96BD8 255 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 CABS1Q96KC9 395 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 PKNOX2Q96KN3 472 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 C12orf66Q96MD2 445 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 TSNARE1Q96NA8 513 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FAM111AQ96PZ2 611 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FERD3LQ96RJ6 166 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 OR52A5Q9H2C5 316 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 NMRAL1Q9HBL8 299 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 TRNAU1APQ9NX07 287 aaKnown RBP8.14□□□□□ -1.11
GPC3-203ENST00000406757 TAAR2Q9P1P5 351 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 DKK4Q9UBT3 224 aa8.14□□□□□ -1.11
GPC3-203ENST00000406757 FTSJ1Q9UET6 329 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms