RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PYDC1Q8WXC3 89 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 MOCOSQ96EN8 888 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 WDR92Q96MX6 357 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 PLEKHG4BQ96PX9 1271 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 OR2M4Q96R27 311 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 CCT7Q99832 543 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 EFCAB11Q9BUY7 163 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 MMADHCQ9H3L0 296 aaPredicted RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 EGFL7Q9UHF1 273 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 ZDHHC2Q9UIJ5 367 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 MRPS33Q9Y291 106 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 FAM92AA1XBS5 289 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 PIPSLA2A3N6 862 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 LOC730098B7Z3J9 87 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 CACNG3O60359 315 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 SEMA4FO95754 770 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 ITGB7P26010 798 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 HNRNPH1P31943 449 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 ALDH6A1Q02252 535 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 LAPTM5Q13571 262 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 TCTN1Q2MV58 587 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 ZBTB49Q6ZSB9 765 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 RBM15BQ8NDT2 890 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 BHLHE22Q8NFJ8 381 aaPredicted RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 OR4E2Q8NGC2 313 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 LPGAT1Q92604 370 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 EXOSC8Q96B26 276 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 CHFRQ96EP1 664 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 PLEKHA8Q96JA3 519 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 GTPBP2Q9BX10 602 aaKnown RBP8.9□□□□□ -0.98
LIG4-202ENST00000405925 VN1R3Q9BXE9 311 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 KLHL25Q9H0H3 589 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 TRIM39Q9HCM9 518 aa8.9□□□□□ -0.98
LIG4-202ENST00000405925 TGFB1P01137 390 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ALPPL2P10696 532 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ALAS2P22557 587 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 POU1F1P28069 291 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 SUOXP51687 545 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 NEK2P51955 445 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 POLR2JP52435 117 aaKnown RBP8.9□□□□□ -0.99
LIG4-202ENST00000405925 CYP4F3Q08477 520 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 PRRT3Q5FWE3 981 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 TECRLQ5HYJ1 363 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 PLEKHS1Q5SXH7 462 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 PAOXQ6QHF9 649 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 HSD11B1LQ7Z5J1 315 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ANKRD46Q86W74 232 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ATG16L2Q8NAA4 619 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 OR4F6Q8NGB9 312 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ACTRT2Q8TDY3 377 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 LMX1AQ8TE12 382 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 USP7Q93009 1102 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 ZNF317Q96PQ6 595 aaPredicted RBP8.9□□□□□ -0.99
LIG4-202ENST00000405925 OR52B2Q96RD2 323 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 MCMBPQ9BTE3 642 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 POPDC3Q9HBV1 291 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 SLC2A4RGQ9NR83 387 aa8.9□□□□□ -0.99
LIG4-202ENST00000405925 CPED1A4D0V7 1026 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 DEAF1O75398 565 aaPredicted RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 ASMTP46597 345 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ZNF77Q15935 545 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 WASHC2DQ5SRD0 308 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ARMC3Q5W041 872 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 LIPIQ6XZB0 460 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 THOC6Q86W42 341 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 LIX1Q8N485 282 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 C10orf53Q8N6V4 93 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 OR6Y1Q8NGX8 325 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 PNPT1Q8TCS8 783 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 ITCHQ96J02 903 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 CPEB1Q9BZB8 566 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 CHCHD3Q9NX63 227 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 STX18Q9P2W9 335 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 YBX2Q9Y2T7 364 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 ZNF780BQ9Y6R6 833 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 FAM170BA6NMN3 283 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 LATO43561 262 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ENTPD5O75356 428 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 LDLRP01130 860 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 CD1DP15813 335 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 TYRP1P17643 537 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 GSTA3Q16772 222 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 C9orf64Q5T6V5 341 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 FRG2Q64ET8 278 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ZCCHC8Q6NZY4 707 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 MBOAT1Q6ZNC8 495 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ZNF534Q76KX8 674 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 LPCAT2Q7L5N7 544 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 LRRC70Q7Z2Q7 622 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 GOLGA7Q7Z5G4 137 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ZC3H7AQ8IWR0 971 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 OR13J1Q8NGT2 312 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 C10orf82Q8WW14 230 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 RLN3Q8WXF3 142 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 FRG2BQ96QU4 278 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 KCNA7Q96RP8 456 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms