RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 RPE65Q16518 533 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 TUBB8Q3ZCM7 444 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 HSP90AA5PQ58FG0 334 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 SNAP47Q5SQN1 464 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 NEPROQ6NW34 567 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 AFTPHQ6ULP2 937 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 TAS2R42Q7RTR8 314 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 ARHGAP22Q7Z5H3 698 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 HM13Q8TCT9 377 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 USP7Q93009 1102 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 HDAC10Q969S8 669 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 TLCD1Q96CP7 247 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 SMYD2Q9NRG4 433 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 FOXJ2Q9P0K8 574 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 SLC2A6Q9UGQ3 507 aa16.1■□□□□ 0.17
CGREF1-205ENST00000404694 MGAQ8IWI9 3026 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 AHCTF1Q8WYP5 2266 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 CCDC162PA2VCL2 907 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 SMIM23A6NLE4 172 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 A8MU76 341 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 CXorf49A8MYA2 514 aaPredicted RBP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 C9orf172C9J069 976 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 FAM155BO75949 473 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 SNRPAP09012 282 aaKnown RBP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 TYRP1P17643 537 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 FOXN2P32314 431 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 GFERP55789 205 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 CLN3Q13286 438 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 EFTUD2Q15029 972 aaKnown RBP eCLIP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 DBN1Q16643 649 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 MRNIPQ6NTE8 343 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 PLXDC1Q8IUK5 500 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 OR6P1Q8NGX9 317 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 RSC1A1Q92681 617 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 TCF12Q99081 682 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 WWP1Q9H0M0 922 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 PRORYQ9H606 182 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 IMP3Q9NV31 184 aaKnown RBP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 KLHL3Q9UH77 587 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 ACSL5Q9ULC5 683 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
CGREF1-205ENST00000404694 CFAP20Q9Y6A4 193 aaKnown RBP16.09■□□□□ 0.17
CGREF1-205ENST00000404694 PFDN6O15212 129 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 C9P02748 559 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 SLC35G4P0C7Q5 338 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 MTHFD1P11586 935 aaKnown RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 AMD1P17707 334 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 OGNP20774 298 aaKnown RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 SPRP35270 261 aaPredicted RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 CAPZBP47756 277 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 BROXQ5VW32 411 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 PACS1Q6VY07 963 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 SDCCAG8Q86SQ7 713 aaPredicted RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 FAM129CQ86XR2 697 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 CFAP206Q8IYR0 622 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 UNC5BQ8IZJ1 945 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 CLDN19Q8N6F1 224 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 C2CD4AQ8NCU7 369 aaPredicted RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 OR4L1Q8NH43 312 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 PMEPA1Q969W9 287 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 C12orf66Q96MD2 445 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 INSM2Q96T92 566 aaPredicted RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 B3GNT4Q9C0J1 378 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 IARS2Q9NSE4 1012 aaKnown RBP16.08■□□□□ 0.16
CGREF1-205ENST00000404694 OCIAD1Q9NX40 245 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 VPS9D1Q9Y2B5 631 aa16.08■□□□□ 0.16
CGREF1-205ENST00000404694 IGSF10Q6WRI0 2623 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 SDK2Q58EX2 2172 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 C17orf113A0A1B0GUU1 675 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 EFCAB7A8K855 629 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 GOT2P00505 430 aaKnown RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 KRT15P19012 456 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 PPARGP37231 505 aaPredicted RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 NSG1P42857 185 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 UCNP55089 124 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 ITIH4Q14624 930 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TMED2Q15363 201 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 ZNF658BQ4V348 819 aaPredicted RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 AARS2Q5JTZ9 985 aaKnown RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TMEM164Q5U3C3 297 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 DUS1LQ6P1R4 473 aaKnown RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TIFABQ6ZNK6 161 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 STRA8Q7Z7C7 330 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 BMPERQ8N8U9 685 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 RMDN2Q96LZ7 410 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TGM7Q96PF1 710 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TAAR9Q96RI9 348 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 RBBP8Q99708 897 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 CCM2Q9BSQ5 444 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 COG4Q9H9E3 785 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 CATSPERZQ9NTU4 200 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 TBK1Q9UHD2 729 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 FBXO5Q9UKT4 447 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 CORO1CQ9ULV4 474 aaPredicted RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 NOVA2Q9UNW9 492 aaKnown RBP16.07■□□□□ 0.16
CGREF1-205ENST00000404694 PCDHGA3Q9Y5H0 932 aa16.07■□□□□ 0.16
CGREF1-205ENST00000404694 B4E171 279 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms