RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CDKL4Q5MAI5 379 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 FAM151BQ6UXP7 276 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 LINC00299Q6ZSB3 139 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 RNF180Q86T96 592 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 RGL4Q8IZJ4 473 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ZBTB2Q8N680 514 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ARL10Q8N8L6 244 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PIH1D2Q8WWB5 315 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 FAM120BQ96EK7 910 aaKnown RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 MYO19Q96H55 970 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TBCDQ9BTW9 1192 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 RMND5AQ9H871 391 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ZFYVE1Q9HBF4 777 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ZFP14Q9HCL3 533 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TRPM5Q9NZQ8 1165 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PCDHGB1Q9Y5G3 927 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 A0A096LPI6 279 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 A0A0U1RQS6 177 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 H0Y626 953 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 SLC1A7O00341 560 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GAPDHSO14556 408 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 FFAR3O14843 346 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GPR42O15529 346 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ZSCAN9O15535 394 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HS6ST1O60243 411 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 E2F6O75461 281 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PRAMEF12O95522 483 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 KRT6AP02538 564 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 KRT6BP04259 564 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ACRV1P26436 265 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 KRT6CP48668 564 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HMGCS1Q01581 520 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GSTM4Q03013 218 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TTLL9Q3SXZ7 439 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GPRC6AQ5T6X5 926 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 SUSD1Q6UWL2 747 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 MACC1Q6ZN28 852 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GCNT7Q6ZNI0 430 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ANKRD13BQ86YJ7 626 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TMEM132CQ8N3T6 1108 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 SLC15A4Q8N697 577 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 FBLIM1Q8WUP2 373 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 NCLNQ969V3 563 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 NODALQ96S42 347 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CSF3RQ99062 836 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TMEM175Q9BSA9 504 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 FUNDC2Q9BWH2 189 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 BOCQ9BWV1 1114 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 APOL5Q9BWW9 433 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 LATS2Q9NRM7 1088 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GKN1Q9NS71 199 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 WARS2Q9UGM6 360 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TSR3Q9UJK0 312 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 STOML2Q9UJZ1 356 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PCDHB14Q9Y5E9 798 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 LOC730098B7Z3J9 87 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 M0QX08 132 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 STK16O75716 305 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TRIM16O95361 564 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 LATS1O95835 1130 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HTR1AP08908 422 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TFPTP0C1Z6 253 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CBSLP0DN79 551 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ITGAMP11215 1152 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PRPS2P11908 318 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PORP16435 677 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CTPS1P17812 591 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ITGB6P18564 788 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CBSP35520 551 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GDF5P43026 501 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GZMMP51124 257 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HNRNPFP52597 415 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ACLYP53396 1101 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CLDN8P56748 225 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 RPS14P62263 151 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PHEXP78562 749 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PHKG1Q16816 387 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CTU2Q2VPK5 515 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GPR33Q49SQ1 333 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 SLC8B1Q6J4K2 584 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 GALNT18Q6P9A2 607 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CRTC3Q6UUV7 619 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 LRRC8DQ7L1W4 858 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 DCP2Q8IU60 420 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HS3ST5Q8IZT8 346 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CENPSQ8N2Z9 138 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 LKAAEAR1Q8TD35 194 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PYURFQ96I23 114 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF347Q96SE7 839 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 CPPED1Q9BRF8 314 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 HTATIP2Q9BUP3 242 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 KLF16Q9BXK1 252 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 TRIT1Q9H3H1 467 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 FARSBQ9NSD9 589 aaKnown RBP10.5□□□□□ -0.73
CLIP4-204ENST00000404424 KLHL42Q9P2K6 505 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms