RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZFPM2Q8WW38 1151 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TSPAN17Q96FV3 270 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IL17FQ96PD4 163 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC38A3Q99624 504 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NUDT22Q9BRQ3 303 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TRIT1Q9H3H1 467 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TFB2MQ9H5Q4 396 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 STN1Q9H668 368 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IGSF5Q9NSI5 407 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ATXN7L1Q9ULK2 861 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PLAAQ9Y263 795 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PTPRBP23467 1997 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UNC13CQ8NB66 2214 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NPEPPSL1A6NEC2 478 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MYO1CO00159 1063 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 BTN3A3O00478 584 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TOP3BO95985 862 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCDC166P0CW27 439 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CD1DP15813 335 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 H2AFXP16104 143 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TYRP1P17643 537 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CNTFP26441 200 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CRABP2P29373 138 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PEBP1P30086 187 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PKLRP30613 574 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RGS4P49798 205 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SERPINB8P50452 374 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC12A2P55011 1212 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PPP1CAP62136 330 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SQSTM1Q13501 440 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PUM1Q14671 1186 aaKnown RBP eCLIP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RASA2Q15283 850 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 AMZ1Q400G9 498 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MAP9Q49MG5 647 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SBSNQ6UWP8 590 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZNF574Q6ZN55 896 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TIFABQ6ZNK6 161 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IQCKQ8N0W5 287 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MYO1HQ8N1T3 1032 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PLD6Q8N2A8 252 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NKAPQ8N5F7 415 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LINC01555Q8NAE3 123 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FBXO15Q8NCQ5 510 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KCTD4Q8WVF5 259 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PTERQ96BW5 349 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LRRN3Q9H3W5 708 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SYTL2Q9HCH5 934 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PDE10AQ9Y233 779 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 COLEC10Q9Y6Z7 277 aa12.05□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ADAMTS20P59510 1910 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 A0A096LPK6 155 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 A0A1W2PPM1 405 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SMIM23A6NLE4 172 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 BTN3A1O00481 513 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZBTB14O43829 449 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KRT38O76015 456 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UBXN7O94888 489 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PROS1P07225 676 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ERGP11308 486 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MAPK9P45984 424 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CAPZBP47756 277 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ID4P47928 161 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KCNC1P48547 511 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GFERP55789 205 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GPLD1P80108 840 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZNF844Q08AG5 666 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SP140Q13342 867 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 BIRC2Q13490 618 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CSHL1Q14406 222 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KRT33BQ14525 404 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TSNQ15631 228 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZXDCQ2QGD7 858 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LRRC8EQ6NSJ5 796 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MBOAT1Q6ZNC8 495 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SH2D5Q6ZV89 423 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UBE2R2Q712K3 238 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 B3GNT8Q7Z7M8 397 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ADGRF3Q8IZF5 1079 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FLVCR1-AS1Q8TAF5 88 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ADAMTS14Q8WXS8 1223 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GPR78Q96P69 363 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZIM3Q96PE6 472 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PKP4Q99569 1192 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TMEM109Q9BVC6 243 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC12A9Q9BXP2 914 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DERL2Q9GZP9 239 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms