RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 GBP5Q96PP8 586 aa11.63□□□□□ -0.55
TFF3-202ENST00000398431 SPHK1Q9NYA1 384 aa11.63□□□□□ -0.55
TFF3-202ENST00000398431 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
TFF3-202ENST00000398431 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
TFF3-202ENST00000398431 PRSS21Q9Y6M0 314 aa11.63□□□□□ -0.55
TFF3-202ENST00000398431 SNRNP200O75643 2136 aaKnown RBP11.63□□□□□ -0.55
TFF3-202ENST00000398431 DOCK10Q96BY6 2186 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 MYO9AB2RTY4 2548 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 POLEQ07864 2286 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 H7C0S8 307 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
TFF3-202ENST00000398431 NRDCO43847 1150 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 UGT2B7P16662 529 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 ITGALP20701 1170 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 ACRV1P26436 265 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 DCTP40126 519 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 RPA4Q13156 261 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 MYBPC3Q14896 1274 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 DEFB110Q30KQ9 67 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 C1orf189Q5VU69 101 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 KCTD11Q693B1 232 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 ITPRIPL1Q6GPH6 555 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 SPESP1Q6UW49 350 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 MAMDC2Q7Z304 686 aaPredicted RBP11.62□□□□□ -0.55
TFF3-202ENST00000398431 CCDC50Q8IVM0 306 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 GALNT16Q8N428 558 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 DNAJC22Q8N4W6 341 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 OR5AR1Q8NGP9 310 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 CCDC110Q8TBZ0 833 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 CDKN2AIPNLQ96HQ2 116 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 DNAJC1Q96KC8 554 aaKnown RBP11.62□□□□□ -0.55
TFF3-202ENST00000398431 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 TBL1YQ9BQ87 522 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 HGH1Q9BTY7 390 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 SLC29A3Q9BZD2 475 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 SLC7A5P2Q9GIP4 190 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 CHRNA10Q9GZZ6 450 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 SLC22A11Q9NSA0 550 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 P4HTMQ9NXG6 502 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
TFF3-202ENST00000398431 CDYLQ9Y232 598 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 B3GNT3Q9Y2A9 372 aa11.62□□□□□ -0.55
TFF3-202ENST00000398431 PTRH2Q9Y3E5 179 aaKnown RBP11.62□□□□□ -0.55
TFF3-202ENST00000398431 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 C9J4A7 227 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
TFF3-202ENST00000398431 OR2B3O76000 313 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 UMODP07911 640 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 UQCRHP07919 91 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 RBP3P10745 1247 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 TPH1P17752 444 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 PSMA3P25788 255 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 GCGRP47871 477 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 COPS2P61201 443 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 DCDP81605 110 aaKnown RBP11.61□□□□□ -0.55
TFF3-202ENST00000398431 DBN1Q16643 649 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 KYNUQ16719 465 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 Q6ZS92 163 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 PPP1R32Q7Z5V6 425 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 CUZD1Q86UP6 607 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 GPR135Q8IZ08 494 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 IQCKQ8N0W5 287 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 C19orf47Q8N9M1 422 aaKnown RBP11.61□□□□□ -0.55
TFF3-202ENST00000398431 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 SPC24Q8NBT2 197 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 OR2Y1Q8NGV0 311 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 PTERQ96BW5 349 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 SPATA13Q96N96 652 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 IP6K3Q96PC2 410 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
TFF3-202ENST00000398431 IMPACTQ9P2X3 320 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 DHCR7Q9UBM7 475 aaKnown RBP11.61□□□□□ -0.55
TFF3-202ENST00000398431 EFR3BQ9Y2G0 817 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 PADI2Q9Y2J8 665 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 PCDHA3Q9Y5H8 950 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 AP1M2Q9Y6Q5 423 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 CENPEQ02224 2701 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 CELSR2Q9HCU4 2923 aa11.61□□□□□ -0.55
TFF3-202ENST00000398431 SLC5A10A0PJK1 596 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 KCNN4O15554 427 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 MAP3K7O43318 606 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 CHRM5P08912 532 aaPredicted RBP11.6□□□□□ -0.55
TFF3-202ENST00000398431 ITGAXP20702 1163 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 PEBP1P30086 187 aaKnown RBP11.6□□□□□ -0.55
TFF3-202ENST00000398431 EIF3EP60228 445 aaKnown RBP11.6□□□□□ -0.55
TFF3-202ENST00000398431 PRPSAP1Q14558 356 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 C11orf63Q6NUN7 778 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 AADACL2Q6P093 401 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 NAPRTQ6XQN6 538 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 TAS2R42Q7RTR8 314 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 FAM20CQ8IXL6 584 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 ZNF655Q8N720 491 aaPredicted RBP11.6□□□□□ -0.55
TFF3-202ENST00000398431 PROKR1Q8TCW9 393 aa11.6□□□□□ -0.55
TFF3-202ENST00000398431 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.6□□□□□ -0.55
TFF3-202ENST00000398431 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms