RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 UTP6Q9NYH9 597 aaKnown RBP16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 ADAMTS9Q9P2N4 1935 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 ARHGEF17Q96PE2 2063 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 ARHGEF33A8MVX0 844 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 KLF11O14901 512 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 FFAR2O15552 330 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CEACAM1P13688 526 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 SPINK2P20155 84 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 IDSP22304 550 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 AK4P27144 223 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 RPL10P27635 214 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 AFF3P51826 1226 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 PRKAA2P54646 552 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CBX1P83916 185 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CDKL1Q00532 357 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 GRIK2Q13002 908 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 TUBB8Q3ZCM7 444 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 ZNF542PQ5EBM4 170 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CAPRIN2Q6IMN6 1127 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 UNC5DQ6UXZ4 953 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 ZCCHC23Q6ZST2 131 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 TRIM42Q8IWZ5 723 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 PHACTR4Q8IZ21 702 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CFAP61Q8NHU2 1237 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 GPBAR1Q8TDU6 330 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 LRRC8CQ8TDW0 803 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 PHF21BQ96EK2 531 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 FOPNLQ96NB1 174 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 CAMK1GQ96NX5 476 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 TMEM237Q96Q45 408 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 DNAAF2Q9NVR5 837 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 NCKIPSDQ9NZQ3 722 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 TMCO1Q9UM00 188 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 PSMD13Q9UNM6 376 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 WDR37Q9Y2I8 494 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
TSPAN4-205ENST00000397406 TPRP12270 2363 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 ACACBO00763 2458 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 CATP04040 527 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 SLC35G4P0C7Q5 338 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 NEFHP12036 1026 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 GFAPP14136 432 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 CYP2A7P20853 494 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 RPIAP49247 311 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 CSNK1EP49674 416 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 PFKFB4Q16877 469 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 CDKL4Q5MAI5 379 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 FBXO39Q8N4B4 442 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 PTGR2Q8N8N7 351 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 FBXO15Q8NCQ5 510 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 L3HYPDHQ96EM0 354 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 ZNF317Q96PQ6 595 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 GATA5Q9BWX5 397 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 TBC1D29Q9UFV1 150 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 PI4KAP42356 2102 aa16.5■□□□□ 0.23
TSPAN4-205ENST00000397406 A0A1B0GTW7 788 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 NCF1BA6NI72 391 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 NCF1CA8MVU1 366 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 TCP11X1B4DZS4 312 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 STX16-NPEPL1H3BU86 382 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 STX16O14662 325 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 H2AFYO75367 372 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 C1orf105O95561 183 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 CSF2P04141 144 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 SERPINE1P05121 402 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 NCF1P14598 390 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 JUNDP17535 347 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 IMPDH1P20839 514 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 BDKRB1P46663 353 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 BLKP51451 505 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 NAGLUP54802 743 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 ALDH18A1P54886 795 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 AP1S2P56377 157 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 BST1Q10588 318 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 ASPHQ12797 758 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 ZNF678Q5SXM1 525 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 WASH2PQ6VEQ5 465 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 MBOAT1Q6ZNC8 495 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 MCOLN3Q8TDD5 553 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 SREK1Q8WXA9 508 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 TFGQ92734 400 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 INSM2Q96T92 566 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 WASH6PQ9NQA3 447 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 PRDM8Q9NQV8 689 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 DNAJC28Q9NX36 388 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 PTBP2Q9UKA9 531 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 PCOLCE2Q9UKZ9 415 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 ASPMQ8IZT6 3477 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
TSPAN4-205ENST00000397406 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 KNL1Q8NG31 2342 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 KRT87PA6NCN2 255 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms