RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZRANB3Q5FWF4 1079 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 LYPLAL1Q5VWZ2 237 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 DUS1LQ6P1R4 473 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF449Q6P9G9 518 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 FAM198BQ6UWH4 519 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 RANBP10Q6VN20 620 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 GPR135Q8IZ08 494 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF567Q8N184 647 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 CISD2Q8N5K1 135 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 CLEC1AQ8NC01 280 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 IPMKQ8NFU5 416 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 HM13Q8TCT9 377 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TM9SF4Q92544 642 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 P3H4Q92791 437 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 NACC2Q96BF6 587 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ULK4Q96C45 1275 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TRAPPC9Q96Q05 1148 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 DNAJC7Q99615 494 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 BARD1Q99728 777 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 CHRNA10Q9GZZ6 450 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 MVB12BQ9H7P6 319 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ASF1BQ9NVP2 202 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ZNHIT6Q9NWK9 470 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 LUZP4Q9P127 313 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 KLHL8Q9P2G9 620 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 FAM8A1Q9UBU6 413 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 COPG1Q9Y678 874 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 AP1M2Q9Y6Q5 423 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TNRC6AQ8NDV7 1962 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 APCP25054 2843 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ANKRD17O75179 2603 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GSAPA4D1B5 854 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 C2orf74A8MZ97 194 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GOLGA6L19H0YKK7 550 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 BTN3A3O00478 584 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 KRT86O43790 486 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ZRANB2O95218 330 aaKnown RBP eCLIP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 CRTAMO95727 393 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 CLDN1O95832 211 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 AGTP01019 485 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GSTM1P09488 218 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ATP1B2P14415 290 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ST6GAL1P15907 406 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 PECAM1P16284 738 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 COL8A1P27658 744 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 PRLHRP49683 370 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GEMP55040 296 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 DCDP81605 110 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 XIAPP98170 497 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GSTM4Q03013 218 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 PTCHD3Q3KNS1 767 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 CRB2Q5IJ48 1285 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 DCAF10Q5QP82 559 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 FAM69BQ5VUD6 431 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 MLIPQ5VWP3 458 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 DAAM2Q86T65 1068 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 LUZP1Q86V48 1076 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ZC3H18Q86VM9 953 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 HOOK3Q86VS8 718 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 AMIGO1Q86WK6 493 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 RCOR2Q8IZ40 523 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ADGRF3Q8IZF5 1079 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 SLC34A3Q8N130 599 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GALNT16Q8N428 558 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ZADH2Q8N4Q0 377 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 LILRA3Q8N6C8 439 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 PHC3Q8NDX5 983 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 OR4K2Q8NGD2 314 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 TFGQ92734 400 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 N4BP2L2Q92802 583 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 PTERQ96BW5 349 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 TCTN2Q96GX1 697 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 RMDN2Q96LZ7 410 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 CCDC42Q96M95 316 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 COPS8Q99627 209 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 FERMT1Q9BQL6 677 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 FSD1LQ9BXM9 530 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 OR52A5Q9H2C5 316 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF552Q9H707 407 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 IFNKQ9P0W0 207 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 INTUQ9ULD6 942 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 AAR2Q9Y312 384 aaKnown RBP8.47□□□□□ -1.05
CAPN3-208ENST00000397204 ARL5AQ9Y689 179 aa8.47□□□□□ -1.05
CAPN3-208ENST00000397204 DIDO1Q9BTC0 2240 aaKnown RBP8.46□□□□□ -1.05
CAPN3-208ENST00000397204 TACC2O95359 2948 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 BTN3A1O00481 513 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 DDX3YO15523 660 aaKnown RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 LDB2O43679 373 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 SPOPO43791 374 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 OR2B3O76000 313 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 CBSLP0DN79 551 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms