RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TCRBV9S1A1TA0A576 114 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 MYBPHLA2RUH7 354 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 OR14I1A6ND48 311 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 KHNYNO15037 678 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 DDX3YO15523 660 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 FABP3P05413 133 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 ITGA5P08648 1049 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 CCL5P13501 91 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 TYRP1P17643 537 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 IGFBP5P24593 272 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 RPS9P46781 194 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 IL10RBQ08334 325 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 GPR68Q15743 365 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 TTMPQ5BVD1 217 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 ARSIQ5FYB1 569 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 LRRC69Q6ZNQ3 347 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 TAC4Q86UU9 113 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 ANKRD46Q86W74 232 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 RBP7Q96R05 134 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 CHRAC1Q9NRG0 131 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 POLR3BQ9NW08 1133 aaPredicted RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 B4GALT7Q9UBV7 327 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 YIPF1Q9Y548 306 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 PLA2R1Q13018 1463 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 MYO5CQ9NQX4 1742 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 A6NLC8 198 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 BANF1O75531 89 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 FHP07954 510 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 ERCC1P07992 297 aaPredicted RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 JUPP14923 745 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 GADD45AP24522 165 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 PREPP48147 710 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 GBE1Q04446 702 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 LCP2Q13094 533 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 GTF2H2Q13888 395 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 FAM189A2Q15884 450 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 DECR1Q16698 335 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 GTF2H2CQ6P1K8 395 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 MBOAT1Q6ZNC8 495 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 SLC26A9Q7LBE3 791 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 SLC9B2Q86UD5 537 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 CMTR2Q8IYT2 770 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 ZNF565Q8N9K5 539 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 PSMG2Q969U7 264 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 RADILQ96JH8 1075 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 CNDP2Q96KP4 475 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 EFCAB11Q9BUY7 163 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 NUSAP1Q9BXS6 441 aaKnown RBP7.07□□□□□ -1.28
UPF2-203ENST00000397053 PCDHAC2Q9Y5I4 1007 aa7.07□□□□□ -1.28
UPF2-203ENST00000397053 DAPL1A0PJW8 107 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TP53I11O14683 189 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ATP6V1G2O95670 118 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 S100A1P23297 94 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CLCQ05315 142 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 OCLNQ16625 522 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CNKSR3Q6P9H4 555 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NYAP1Q6ZVC0 841 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CPNE2Q96FN4 548 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 SLC39A3Q9BRY0 314 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 STRA6Q9BX79 667 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 OR8D2Q9GZM6 311 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 SLC32A1Q9H598 525 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TBC1D17Q9HA65 648 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TLR9Q9NR96 1032 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PCDHGB2Q9Y5G2 931 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 MAGEB17A8MXT2 336 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 MFSD11O43934 449 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TACSTD2P09758 323 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZNF16P17020 682 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 SMPD1P17405 629 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ACVR2AP27037 513 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZNF41P51814 821 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 NDST2P52849 883 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 POU5F1Q01860 360 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 UGCGQ16739 394 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GPR107Q5VW38 600 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ADNP2Q6IQ32 1131 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 C3orf33Q6P1S2 294 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GDPD4Q6W3E5 623 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PROKR2Q8NFJ6 384 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 HM13Q8TCT9 377 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TWIST2Q8WVJ9 160 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 SMPDL3AQ92484 453 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GTPBP3Q969Y2 492 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 FAM84AQ96KN4 292 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CAMK1GQ96NX5 476 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PLEKHG4BQ96PX9 1271 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CPXM1Q96SM3 734 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 AIFM2Q9BRQ8 373 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GPATCH1Q9BRR8 931 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 LGR4Q9BXB1 951 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 IL25Q9H293 177 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 WDR55Q9H6Y2 383 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 MEAF6Q9HAF1 191 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PCDHB16Q9NRJ7 776 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 MATN3O15232 486 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 LYPLA1O75608 230 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms