RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.34
MCF2L-208ENST00000397030 CHID1Q9BWS9 393 aa17.14■□□□□ 0.34
MCF2L-208ENST00000397030 RAPGEFL1Q9UHV5 662 aa17.14■□□□□ 0.34
MCF2L-208ENST00000397030 OR1I1O60431 355 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 NME6O75414 186 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 PPM1JQ5JR12 505 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 LRRC38Q5VT99 294 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 C12orf76Q8N812 135 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 IRF7Q92985 503 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 SLC22A18Q96BI1 424 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 TCRBV9S1A1TA0A576 114 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 ERI3O43414 337 aaKnown RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 SELENOVP59797 346 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 PPIDQ08752 370 aaKnown RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 CBX3Q13185 183 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 IL17AQ16552 155 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 HSDL2Q6YN16 418 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 KBTBD8Q8NFY9 601 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 ZSWIM3Q96MP5 696 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 SUV39H2Q9H5I1 410 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 WBP11Q9Y2W2 641 aaKnown RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 PSMG1O95456 288 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 NDST2P52849 883 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 SEMA3AQ14563 771 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 ZNF227Q86WZ6 799 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 OR2L8Q8NGY9 312 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 NSMCE3Q96MG7 304 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 GPR174Q9BXC1 333 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 GDF3Q9NR23 364 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 FADS2P1A8MWK0 482 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 MPIP34949 423 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 TAF1AQ15573 450 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-208ENST00000397030 EIPR1Q53HC9 387 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 FNIP1Q8TF40 1166 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 TLR10Q9BXR5 811 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 MAFFQ9ULX9 164 aa17.14■□□□□ 0.33
MCF2L-208ENST00000397030 C8orf89P0DMQ9 161 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 GBE1Q04446 702 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 CMTR2Q8IYT2 770 aaKnown RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 TBC1D17Q9HA65 648 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 SLC2A4RGQ9NR83 387 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 TYRP14679 529 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 PTNP21246 168 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 HTRA3P83110 453 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 CLCQ05315 142 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 SIM2Q14190 667 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 LRRTM4Q86VH4 590 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ZNF296Q8WUU4 475 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 TCAF1Q9Y4C2 921 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 MATN3O15232 486 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 RB1P06400 928 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 CHRM5P08912 532 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 GPAT4Q86UL3 456 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 OR5AK3PQ8NH89 298 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 MIPEPQ99797 713 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 SGIP1Q9BQI5 828 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 CALML5Q9NZT1 146 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 GPR34Q9UPC5 381 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 MYOCOSA0A1B0GUC4 107 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 IPO13O94829 963 aaKnown RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 SCGB1D2O95969 90 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 MT-ND1P03886 318 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ID2Q02363 134 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 PLEKHG6Q3KR16 790 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 NAIF1Q69YI7 327 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 CRTC1Q6UUV9 634 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ANKZF1Q9H8Y5 726 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 FAM221BA6H8Z2 402 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 HDAC3O15379 428 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 MAGP20916 626 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ECHS1P30084 290 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
MCF2L-208ENST00000397030 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 COPS4Q9BT78 406 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 TRIM39Q9HCM9 518 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 RNF186Q9NXI6 227 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 ERVK-18Q9QC07 812 aa17.13■□□□□ 0.33
MCF2L-208ENST00000397030 A0A1W2PPL8 197 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 LOC110117498-PIK3R3F6TDL0 507 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 GPR107Q5VW38 600 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 CERS6Q6ZMG9 384 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 MSANTD1Q6ZTZ1 278 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 PIK3R3Q92569 461 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 PYCR2Q96C36 320 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 GLS2Q9UI32 602 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 IL12AP29459 219 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 NSG1P42857 185 aa17.12■□□□□ 0.33
MCF2L-208ENST00000397030 SLBPQ14493 270 aaKnown RBP eCLIP17.12■□□□□ 0.33
MCF2L-208ENST00000397030 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
MCF2L-208ENST00000397030 CDK15Q96Q40 435 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms