RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SCN3BQ9NY72 215 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 M0QZ92 97 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 TAF4O00268 1085 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 TNFRSF10BO14763 440 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 PTTG1O95997 202 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 RPS17P08708 135 aaKnown RBP23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 UROSP10746 265 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 SIM2Q14190 667 aaPredicted RBP23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 Q6ZSR9 355 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 GPRIN3Q6ZVF9 776 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 PIANPQ8IYJ0 282 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 UMODL1-AS1Q8N2C9 162 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 EFHBQ8N7U6 833 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 GIPC2Q8TF65 315 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 LINGO1Q96FE5 620 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 THUMPD3Q9BV44 507 aaKnown RBP23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 ANKHQ9HCJ1 492 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 VAPAQ9P0L0 249 aa23.53■■□□□ 1.36
CSNK1E-203ENST00000396832 FAM172BPA6NC97 362 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CENPBD1B2RD01 187 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 HOXC11O43248 304 aaPredicted RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CAPN1P07384 714 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 ERVPABLB-1P60509 514 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PSAPL1Q6NUJ1 521 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CCBE1Q6UXH8 406 aaPredicted RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 ZNF540Q8NDQ6 660 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CLHC1Q8NHS4 586 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 NUSAP1Q9BXS6 441 aaKnown RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 MMP27Q9H306 513 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 ZBTB20Q9HC78 741 aaPredicted RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 ACOT13Q9NPJ3 140 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 LOC285095A0A1B0GVY8 99 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 FFAR3O14843 346 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 GPR42O15529 346 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CYP4B1P13584 511 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 JUNDP17535 347 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 TRAF3Q13114 568 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PWP1Q13610 501 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PPP2R2DQ66LE6 453 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CES5AQ6NT32 575 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 FKBP9P1Q75LS8 142 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PLEKHH3Q7Z736 793 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PHACTR4Q8IZ21 702 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 FAM162AQ96A26 154 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 RHBDF1Q96CC6 855 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 CCDC115Q96NT0 180 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 PKMYT1Q99640 499 aa23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 POLR1EQ9GZS1 481 aaKnown RBP23.52■■□□□ 1.36
CSNK1E-203ENST00000396832 ITGB6P18564 788 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 HOXD11P31277 338 aaPredicted RBP23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 RGRP47804 291 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 FCGRTP55899 365 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 ARPP19P56211 112 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 PLEKHG6Q3KR16 790 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 GTDC1Q4AE62 458 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 SGO1Q5FBB7 561 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 TUBA3EQ6PEY2 450 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 TMC5Q6UXY8 1006 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 SAPCD2Q86UD0 394 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 METTL6Q8TCB7 284 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 BRI3BPQ8WY22 251 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 NCLNQ969V3 563 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 OR2B2Q9GZK3 357 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 ZFP14Q9HCL3 533 aa23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 PRDM5Q9NQX1 630 aaPredicted RBP23.52■■□□□ 1.35
CSNK1E-203ENST00000396832 GUCA1CO95843 209 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 CD52P31358 61 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 CLK1P49759 484 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 CD300LGQ6UXG3 332 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 ARMCX6Q7L4S7 300 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 GLT6D1Q7Z4J2 308 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 ZNF467Q7Z7K2 595 aaPredicted RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 SYTL1Q8IYJ3 562 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 METTL4Q8N3J2 472 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 OR7G1Q8NGA0 311 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 CDK5RAP1Q96SZ6 601 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 ACTL8Q9H568 366 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 N6AMT1Q9Y5N5 214 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 GRXCR2A6NFK2 248 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 MRPS6P82932 125 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 E2F2Q14209 437 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 SMN1Q16637 294 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 RFTN2Q52LD8 501 aaPredicted RBP23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 SPATC1Q76KD6 591 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 KIAA1958Q8N8K9 716 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 SETD9Q8NE22 299 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 SPON2Q9BUD6 331 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 NEUROG3Q9Y4Z2 214 aa23.51■■□□□ 1.35
CSNK1E-203ENST00000396832 ARNTLO00327 626 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 RGS10O43665 173 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 BMP1P13497 986 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 RHOQP17081 205 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 RFX4Q33E94 735 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 EFL1Q7Z2Z2 1120 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 MILR1Q7Z6M3 343 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 MICU2Q8IYU8 434 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 OR8J3Q8NGG0 315 aa23.5■■□□□ 1.35
CSNK1E-203ENST00000396832 DERL2Q9GZP9 239 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms