RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RENP00797 406 aa15.36■□□□□ 0.05
GNE-202ENST00000396594 CDH1P12830 882 aa15.36■□□□□ 0.05
GNE-202ENST00000396594 PITPNAQ00169 270 aa15.36■□□□□ 0.05
GNE-202ENST00000396594 GPR22Q99680 433 aa15.36■□□□□ 0.05
GNE-202ENST00000396594 RPL36Q9Y3U8 105 aaKnown RBP15.36■□□□□ 0.05
GNE-202ENST00000396594 PEX16Q9Y5Y5 336 aa15.36■□□□□ 0.05
GNE-202ENST00000396594 C9IYK1 514 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 TOP3BO95985 862 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 GSTT2BP0CG30 244 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SHMT2P34897 504 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SLC1A2P43004 574 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 RPS9P46781 194 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 DMPKQ09013 629 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SCAPQ12770 1279 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 FBXL22Q6P050 247 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 CYP2U1Q7Z449 544 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 RBM23Q86U06 439 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 LIX1Q8N485 282 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 KCNJ9Q92806 393 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 EFHD2Q96C19 240 aaPredicted RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 C12orf66Q96MD2 445 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SLC2A13Q96QE2 648 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SP140LQ9H930 580 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 CAB39LQ9H9S4 337 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 PCDHGB2Q9Y5G2 931 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 CRYBG1Q9Y4K1 1723 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 FADS2O95864 444 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 CD2P06729 351 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 CAPN1P07384 714 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 MASP1P48740 699 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 MPP1Q00013 466 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SMU1Q2TAY7 513 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 METTL2BQ6P1Q9 378 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 C22orf39Q6P5X5 142 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SUN3Q8TAQ9 357 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 CDKN2AIPNLQ96HQ2 116 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 VPS29Q9UBQ0 182 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 LOC110117498-PIK3R3F6TDL0 507 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 TACSTD2P09758 323 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 UGT1A3P35503 534 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 ABCG1P45844 678 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 RNF148Q8N7C7 305 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 COX18Q8N8Q8 333 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 PIK3R3Q92569 461 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SIPA1Q96FS4 1042 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 RDH12Q96NR8 316 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 BTBD1Q9H0C5 482 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SCN11AQ9UI33 1791 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 MATN4O95460 622 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 LMO2P25791 158 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 RASGEF1BQ0VAM2 473 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 GRIK2Q13002 908 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 SEMA3AQ14563 771 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 ALYREFQ86V81 257 aaKnown RBP15.35■□□□□ 0.05
GNE-202ENST00000396594 EPB41L1Q9H4G0 881 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 HSFX1Q9UBD0 423 aa15.35■□□□□ 0.05
GNE-202ENST00000396594 EIF4E1BA6NMX2 242 aaKnown RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 CXCR6O00574 342 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 INPPL1O15357 1258 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 SNTA1Q13424 505 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 ZNF630Q2M218 657 aaPredicted RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 ITPRIPL2Q3MIP1 535 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 RBM48Q5RL73 367 aaKnown RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 GEMIN6Q8WXD5 167 aaKnown RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 DSN1Q9H410 356 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 PCDHB16Q9NRJ7 776 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 PDP1Q9P0J1 537 aaPredicted RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 MTMR11A4FU01 709 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 TFPIP10646 304 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 SLC25A11Q02978 314 aaKnown RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 FBXO43Q4G163 708 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 SWT1Q5T5J6 900 aaKnown RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 PRSS55Q6UWB4 352 aaPredicted RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 GPR152Q8TDT2 470 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 E2F3O00716 465 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 MNDAP41218 407 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 IDH3AP50213 366 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 CDH13P55290 713 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 HID1Q8IV36 788 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 GOLM1Q8NBJ4 401 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 MFSD3Q96ES6 412 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 BHMG1C9JSJ3 638 aaPredicted RBP15.34■□□□□ 0.05
GNE-202ENST00000396594 BANF1O75531 89 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 GSTM2P28161 218 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 SLC25A24Q6NUK1 477 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 MSANTD1Q6ZTZ1 278 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 UMODL1-AS1Q8N2C9 162 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 LMLNQ96KR4 655 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 EHD1Q9H4M9 534 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 RERGLQ9H628 205 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 PCDHGC4Q9Y5F7 938 aa15.34■□□□□ 0.05
GNE-202ENST00000396594 PIGBOS1A0A0B4J2F0 54 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 SOBPA7XYQ1 873 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 PCDH7O60245 1069 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 PRKCHP24723 683 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 SNAPC1Q16533 368 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 ATG14Q6ZNE5 492 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 PJA1Q8NG27 643 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 OR4C6Q8NH72 309 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 MAPKAP1Q9BPZ7 522 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms