RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CAMKVQ8NCB2 501 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 C7orf57Q8NEG2 295 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PCDH19Q8TAB3 1148 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CPNE2Q96FN4 548 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 C12orf66Q96MD2 445 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PSKH2Q96QS6 385 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OSBPL2Q9H1P3 480 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DPEP3Q9H4B8 488 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 MCM8Q9UJA3 840 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 STOML2Q9UJZ1 356 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CPQQ9Y646 472 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 WNT7AO00755 349 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PDCD5O14737 125 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF208O43345 1280 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RENP00797 406 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PIGRP01833 764 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TIE1P35590 1138 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SYVN1Q86TM6 617 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 P2RY8Q86VZ1 359 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 KREMEN2Q8NCW0 462 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CD99L2Q8TCZ2 262 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IPCEF1Q8WWN9 437 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLC35G5Q96KT7 338 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 HIST1H2AAQ96QV6 131 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 MNTQ99583 582 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ATG10Q9H0Y0 220 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 GRIP1Q9Y3R0 1128 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ARL5AQ9Y689 179 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CAPN8A6NHC0 703 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TFECO14948 347 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PIP5K1BO14986 540 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IMPDH1P20839 514 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 LMO2P25791 158 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CASRP41180 1078 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 HCAR3P49019 387 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SERINC3Q13530 473 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RBM48Q5RL73 367 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM164Q5U3C3 297 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM145Q8NBT3 493 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FAM13CQ8NE31 585 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OR2L5Q8NG80 312 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OR52J3Q8NH60 311 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RAB2BQ8WUD1 216 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DIRAS2Q96HU8 199 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 USP29Q9HBJ7 922 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DMAC2Q9NW81 257 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZDHHC3Q9NYG2 299 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 COL20A1Q9P218 1284 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 VPS29Q9UBQ0 182 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLC31A1O15431 190 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PSIP1O75475 530 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ALPPP05187 535 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF30P17039 623 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 USP43Q70EL4 1123 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM110Q86TL2 294 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ECHDC2Q86YB7 292 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OR7D4Q8NG98 312 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FAR1Q8WVX9 515 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NUS1Q96E22 293 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SUSD3Q96L08 255 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IFT46Q9NQC8 304 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SERINC1Q9NRX5 453 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CFL2Q9Y281 166 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ILVBLA1L0T0 632 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 YJEFN3A6XGL0 299 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SMU1Q2TAY7 513 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SWT1Q5T5J6 900 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DNM1P34Q6PK57 102 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RASSF6Q6ZTQ3 369 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 USP30Q70CQ3 517 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TAC4Q86UU9 113 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CADM2Q8N3J6 435 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 GRPEL2Q8TAA5 225 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SHDQ96IW2 340 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 EFCAB11Q9BUY7 163 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DUSP26Q9BV47 211 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 DENND2DQ9H6A0 471 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OSER1Q9NX31 292 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FCF1Q9Y324 198 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ABCC6O95255 1503 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SCDO00767 359 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 OR4F21O95013 312 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 H6PDO95479 791 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ACVR2AP27037 513 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CCKBRP32239 447 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PCDH1Q08174 1060 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PUDPQ08623 228 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TARDBPQ13148 414 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 RAB43Q86YS6 212 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SNIP1Q8TAD8 396 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PIGKQ92643 395 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TOP1MTQ969P6 601 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 COPS4Q9BT78 406 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SUV39H2Q9H5I1 410 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MAGEE1Q9HCI5 957 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 R3HDM2Q9Y2K5 976 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms