RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR56A5P0C7T3 313 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 GATMP50440 423 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 NUDT6P53370 316 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 INO80DQ53TQ3 878 aaPredicted RBP15.82■□□□□ 0.12
PCDH1-203ENST00000394536 C11orf96Q7Z7L8 435 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 ZNF605Q86T29 641 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 ZBTB8BQ8NAP8 495 aaPredicted RBP15.82■□□□□ 0.12
PCDH1-203ENST00000394536 OR5K1Q8NHB7 308 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 SH3KBP1Q96B97 665 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 TMEM169Q96HH4 297 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 PSKH2Q96QS6 385 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 NUAK2Q9H093 628 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 TPK1Q9H3S4 243 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 ZDHHC6Q9H6R6 413 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 ADPRHL2Q9NX46 363 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 RAPGEFL1Q9UHV5 662 aa15.82■□□□□ 0.12
PCDH1-203ENST00000394536 FXYD1O00168 92 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 FPGTO14772 594 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 NFKB2Q00653 900 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 SPDYE7PQ495Y7 208 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 RBM48Q5RL73 367 aaKnown RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 LDLRAD1Q5T700 205 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 FAM9CQ8IZT9 166 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 RAET1EQ8TD07 263 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 BOCQ9BWV1 1114 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 GPR62Q9BZJ7 368 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 WDR12Q9GZL7 423 aaKnown RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PCDHB1Q9Y5F3 818 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 OR6C75A6NL08 312 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 CYP11A1P05108 521 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PPM1FP49593 454 aaPredicted RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 RUNX1T1Q06455 604 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 ANKRD34AQ69YU3 496 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 MDGA1Q8NFP4 955 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 OR2T11Q8NH01 316 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 FOPNLQ96NB1 174 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 ZNF382Q96SR6 550 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 RBM38Q9H0Z9 239 aaKnown RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 AASDHPPTQ9NRN7 309 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 ERVK-18Q9QC07 812 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 SAMD4AQ9UPU9 718 aaKnown RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PCDHA9Q9Y5H5 950 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 CD36P16671 472 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 MED22Q15528 200 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 SPANXN2Q5MJ10 180 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 FUT10Q6P4F1 479 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 CERS6Q6ZMG9 384 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 RNF19BQ6ZMZ0 732 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 KCNJ9Q92806 393 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 CHCHD6Q9BRQ6 235 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 GPBP1L1Q9HC44 474 aaPredicted RBP15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PALMDQ9NP74 551 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 TMEM9Q9P0T7 183 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 PCDHGA11Q9Y5H2 935 aa15.81■□□□□ 0.12
PCDH1-203ENST00000394536 FUOMA2VDF0 154 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 MED26O95402 600 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 SERPINA4P29622 427 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 OPRL1P41146 370 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 YBX1P67809 324 aaKnown RBP15.8■□□□□ 0.12
PCDH1-203ENST00000394536 OR9Q1Q8NGQ5 310 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 TTPALQ9BTX7 342 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 SLC2A11Q9BYW1 496 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDH1-203ENST00000394536 RPS6KA6Q9UK32 745 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 MYO9BQ13459 2157 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 LOC285095A0A1B0GVY8 99 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 MROH6A6NGR9 719 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 SLC38A8A6NNN8 435 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 H0YAE9 185 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 IFRD1O00458 451 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ASNA1O43681 348 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 KRT75O95678 551 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 OPN1SWP03999 348 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 CYP2A7P20853 494 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 NNMTP40261 264 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 CHIT1Q13231 466 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 UGT3A2Q3SY77 523 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ANKRD26P1Q6NSI1 321 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 SVOPLQ8N434 492 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 FAM86B1Q8N7N1 296 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ABHD11Q8NFV4 315 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 TSPEARQ8WU66 669 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 S100ZQ8WXG8 99 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 HERC2P3Q9BVR0 1158 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ZNF451Q9Y4E5 1061 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 LTBP1Q14766 1721 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ELAVL2Q12926 359 aaKnown RBP15.8■□□□□ 0.12
PCDH1-203ENST00000394536 CHRNA6Q15825 494 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 AMER2Q8N7J2 671 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 C8orf48Q96LL4 319 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 CDK5RAP1Q96SZ6 601 aaKnown RBP15.8■□□□□ 0.12
PCDH1-203ENST00000394536 PTPN18Q99952 460 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 ASB1Q9Y576 335 aa15.8■□□□□ 0.12
PCDH1-203ENST00000394536 OR2AG2A6NM03 316 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 H3BN98 237 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 K7ERQ8 282 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 BCAS1O75363 584 aaPredicted RBP15.79■□□□□ 0.12
PCDH1-203ENST00000394536 IL12AP29459 219 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms