RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 GRIP1Q9Y3R0 1128 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 SLITRK5O94991 958 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 GADD45GO95257 159 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 IL7RP16871 459 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 GTF2E2P29084 291 aaKnown RBP19.34■□□□□ 0.69
SHANK1-203ENST00000391813 HSPA7P48741 367 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 CD97P48960 835 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 LDLRAD1Q5T700 205 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 ADNP2Q6IQ32 1131 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 BORAQ6PGQ7 559 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 OTOP2Q7RTS6 562 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 LDB1Q86U70 411 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-203ENST00000391813 DCBLD1Q8N8Z6 715 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 TMPRSS4Q9NRS4 437 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 PCDHB9Q9Y5E1 797 aa19.34■□□□□ 0.69
SHANK1-203ENST00000391813 A0A0X1KG70 313 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SYN3O14994 580 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 TP73O15350 636 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 TSPAN1O60635 241 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 VNN1O95497 513 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 TLX1P31314 330 aaPredicted RBP19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SLC25A11Q02978 314 aaKnown RBP19.33■□□□□ 0.69
SHANK1-203ENST00000391813 MEP1AQ16819 746 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 CTC1Q2NKJ3 1217 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 HTR3EA5X5Y0 456 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 MT-CYBP00156 380 aaPredicted RBP19.33■□□□□ 0.69
SHANK1-203ENST00000391813 CCL5P13501 91 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 PBX3P40426 434 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SLC9A3P48764 834 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SULT2A1Q06520 285 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SGCGQ13326 291 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 DOK6Q6PKX4 331 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 KBTBD6Q86V97 674 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 SCML4Q8N228 414 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 GALNT6Q8NCL4 622 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 BRD9Q9H8M2 597 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 POFUT2Q9Y2G5 429 aa19.33■□□□□ 0.69
SHANK1-203ENST00000391813 PER2O15055 1255 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 MID1O15344 667 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 RASAL1O95294 804 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 GAD2Q05329 585 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ARHGAP1Q07960 439 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ATP6AP1Q15904 470 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 DLK2Q6UY11 383 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ANKFN1Q8N957 763 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 HJURPQ8NCD3 748 aaPredicted RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 OR10G2Q8NGC3 310 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 GTPBP3Q969Y2 492 aaKnown RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF641Q96N77 438 aaPredicted RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 AARSD1Q9BTE6 412 aaKnown RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 CPNE5Q9HCH3 593 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 MYH10P35580 1976 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ALS2Q96Q42 1657 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 TBC1D3BA6NDS4 549 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 SCAMP3O14828 347 aaKnown RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 TOP3BO95985 862 aaKnown RBP19.33■□□□□ 0.68
SHANK1-203ENST00000391813 T-ENOLP0DO92 83 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 ACOX1Q15067 660 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 CCL14Q16627 93 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 C6orf141Q5SZD1 244 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 SLC25A24Q6NUK1 477 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 TBC1D14Q9P2M4 693 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 SLC17A6Q9P2U8 582 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 SEC14L4Q9UDX3 406 aa19.33■□□□□ 0.68
SHANK1-203ENST00000391813 SLC25A14O95258 325 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 BTN2A3PQ96KV6 586 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 MUS81Q96NY9 551 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 NFKBIZQ9BYH8 718 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 HPRP00739 348 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ACSL1P33121 698 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 CACNG1Q06432 222 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ABRQ12979 859 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 SWI5Q1ZZU3 235 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 OAFQ86UD1 273 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ALDH16A1Q8IZ83 802 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 DBF4BQ8NFT6 615 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 TCAF2A6NFQ2 919 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 CCNDBP1O95273 360 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 GSTT2BP0CG30 244 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 FPGSQ05932 587 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 NFATC3Q12968 1075 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 PTGES3Q15185 160 aaKnown RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 CXorf57Q6NSI4 855 aaKnown RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF730Q6ZMV8 503 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ELMOD2Q8IZ81 293 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 POMGNT2Q8NAT1 580 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 BRSK1Q8TDC3 778 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 FCRL4Q96PJ5 515 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 S100A13Q99584 98 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 HNRNPABQ99729 332 aaKnown RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 GTPBP2Q9BX10 602 aaKnown RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 PDZD7Q9H5P4 517 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 PLOD2O00469 737 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ADAMTS3O15072 1205 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 PCDH8O95206 1070 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 ANXA4P09525 319 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 RPL4P36578 427 aaKnown RBP19.32■□□□□ 0.68
SHANK1-203ENST00000391813 DNAJB13P59910 316 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 CYS1Q717R9 158 aa19.32■□□□□ 0.68
SHANK1-203ENST00000391813 NTAN1Q96AB6 310 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms