RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TAS2R40P59535 323 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GAGE2BQ13066 116 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 PLA2G7Q13093 441 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 TRIM14Q14142 442 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 EFR3AQ14156 821 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 TNIP1Q15025 636 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GAGE2EQ4V326 116 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 UTF1Q5T230 341 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GCNT6Q5T4J0 391 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 C20orf194Q5TEA3 1177 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 ADALQ6DHV7 355 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GAGE2AQ6NT46 116 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 LINGO4Q6UY18 593 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 ARHGAP12Q8IWW6 846 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 OR8K5Q8NH50 307 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 KIF1BPQ96EK5 621 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 SLC22A12Q96S37 553 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 EBF4Q9BQW3 602 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 CHRDL1Q9BU40 450 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 C1QTNF1Q9BXJ1 281 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 VN1R1Q9GZP7 353 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 THAP2Q9H0W7 228 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 WNT5BQ9H1J7 359 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 ARRDC1-AS1Q9H2J1 176 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 CPVLQ9H3G5 476 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 PRKRIP1Q9H875 184 aaPredicted RBP0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 CWC15Q9P013 229 aaKnown RBP0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GAGE2DQ9UEU5 116 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 TMEM8BA6NDV4 472 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 F5H423 210 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 GAPDHSO14556 408 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 SMAD9O15198 467 aaKnown RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 CAND2O75155 1236 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 GIG44P09565 113 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 SLC2A2P11168 524 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 ELK1P19419 428 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 CCR5P51681 352 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 XGP55808 180 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 PPIAP62937 165 aaKnown RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 CX3CL1P78423 397 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 CAMK1Q14012 370 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 EFTUD2Q15029 972 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 MS4A18Q3C1V0 323 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 SPECC1Q5M775 1068 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 FAM182AQ5T1J6 154 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 MYLK4Q86YV6 388 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 HSCBQ8IWL3 235 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 MYCT1Q8N699 235 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 TSPYL6Q8N831 410 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 ENAHQ8N8S7 591 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 CSNK1G2-AS1Q8NCQ2 148 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 EXD1Q8NHP7 514 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 RNF128Q8TEB7 428 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 MMABQ96EY8 250 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 FAM218AQ96MZ4 157 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 ATF6BQ99941 703 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 FUZQ9BT04 418 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 KIFC3Q9BVG8 833 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 TMX4Q9H1E5 349 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 S1PR5Q9H228 398 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 JPT2Q9H910 190 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 RANGRFQ9HD47 186 aaPredicted RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 P4HTMQ9NXG6 502 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 KCND2Q9NZV8 630 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 ADAM22Q9P0K1 906 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 DBNLQ9UJU6 430 aaKnown RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 OSGIN1Q9UJX0 560 aa0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 R3HDM2Q9Y2K5 976 aaKnown RBP0.83□□□□□ -2.28
RNU6-239P-201ENST00000390990 POGZQ7Z3K3 1410 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 OTOGLQ3ZCN5 2332 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 PRSS51A0A1B0GVH4 220 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 DDHD2O94830 711 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 KRT18P05783 430 aaKnown RBP0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 MYL1P05976 194 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 IFIT2P09913 472 aaKnown RBP0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 TNFAIP3P21580 790 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 ABCD1P33897 745 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 CHKAP35790 457 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 ATP4BP51164 291 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 KRTAP12-4P60329 112 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 ZBED6P86452 979 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 GCNT1Q02742 428 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 NEXNQ0ZGT2 675 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 PNRC1Q12796 327 aaPredicted RBP0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 FAM189A2Q15884 450 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 GRTP1Q5TC63 336 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 C1orf228Q6PIY5 440 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 TIFABQ6ZNK6 161 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 SEPT14Q6ZU15 432 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 CHMP1BQ7LBR1 199 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 GSTA5Q7RTV2 222 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 EID3Q8N140 333 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 OR13J1Q8NGT2 312 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 PHLDA1Q8WV24 401 aaPredicted RBP0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 APOBEC4Q8WW27 367 aaKnown RBP0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 NSMAFQ92636 917 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 UBAC1Q9BSL1 405 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 CCDC28BQ9BUN5 200 aa0.82□□□□□ -2.28
RNU6-239P-201ENST00000390990 NUP85Q9BW27 656 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms