RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 REV3LO60673 3130 aa8.63□□□□□ -1.03
RNU1-28P-201ENST00000383861 ATG2BQ96BY7 2078 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 A0A1W2PR77 199 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 PDZK1P1A8MUH7 402 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 E2F3O00716 465 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 HGSO14964 777 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 VILLO15195 856 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 HDAC3O15379 428 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 BCAT2O15382 392 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TAPBPO15533 448 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CCNT2O60583 730 aaKnown RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CRCPO75575 148 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 SIX3O95343 332 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CHEK2O96017 543 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TDGF1P13385 188 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 ALOX15P16050 662 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 HSPA7P48741 367 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 AFF3P51826 1226 aaKnown RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 ARFIP2P53365 341 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 C21orf59P57076 290 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 GTF2H2Q13888 395 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 FZD2Q14332 565 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 RBBP7Q16576 425 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 ZNF528Q3MIS6 628 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CES4AQ5XG92 561 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CAPN13Q6MZZ7 669 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 GTF2H2CQ6P1K8 395 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 GPRIN3Q6ZVF9 776 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 CUZD1Q86UP6 607 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 LSMEM2Q8N112 164 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TEX9Q8N6V9 391 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 GPBAR1Q8TDU6 330 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TRPC4APQ8TEL6 797 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 SETD7Q8WTS6 366 aaKnown RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TSACCQ96A04 125 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 ATP6V1E2Q96A05 226 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 PDXPQ96GD0 296 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 C12orf66Q96MD2 445 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 ZNF382Q96SR6 550 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 PKP4Q99569 1192 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 NUSAP1Q9BXS6 441 aaKnown RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 C20orf27Q9GZN8 174 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 PCBD2Q9H0N5 130 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 MIR1-1HGQ9H1L0 117 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TM9SF3Q9HD45 589 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 MID1IP1Q9NPA3 183 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TM7SF3Q9NS93 570 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 MRGBPQ9NV56 204 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 DNAJC11Q9NVH1 559 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 DNAJC28Q9NX36 388 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 GPRC5BQ9NZH0 403 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 KCNK6Q9Y257 313 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 TRAF6Q9Y4K3 522 aa8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 PCYT1BQ9Y5K3 369 aaPredicted RBP8.62□□□□□ -1.03
RNU1-28P-201ENST00000383861 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 A0A1B0GTW7 788 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 MATN2O00339 956 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 EBAG9O00559 213 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 CLGNO14967 610 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 UGDHO60701 494 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 VPS4BO75351 444 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 LYPLA1O75608 230 aaPredicted RBP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 DCTN3O75935 186 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 WDR47O94967 919 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 ESRRBO95718 433 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 CSF2P04141 144 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 ENO1P06733 434 aaKnown RBP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 CHRNGP07510 517 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 EBLN1P0CF75 366 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 KITP10721 976 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 UROSP10746 265 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 BCKDHBP21953 392 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 RPL10P27635 214 aaKnown RBP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 HOXD12P35452 270 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 ACTR1BP42025 376 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 SLC6A12P48065 614 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 AGTR2P50052 363 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 CCNG1P51959 295 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 NUBP1P53384 320 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 CDH13P55290 713 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 ACTR1AP61163 376 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 HNRNPKP61978 463 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 PCDH1Q08174 1060 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 EIF2B5Q13144 721 aaKnown RBP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 ELOCQ15369 112 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 SH2D4BQ5SQS7 431 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 PMS2CLQ68D20 193 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 AGTRAPQ6RW13 159 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 XKR5Q6UX68 686 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 GOLGA7Q7Z5G4 137 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 RABEPKQ7Z6M1 372 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 MILR1Q7Z6M3 343 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 GKN2Q86XP6 184 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 PHACTR4Q8IZ21 702 aa8.61□□□□□ -1.03
RNU1-28P-201ENST00000383861 SLC22A18ASQ8N1D0 253 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms