RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ILVBLA1L0T0 632 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 KLF11O14901 512 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 REM1O75628 298 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 TIE1P35590 1138 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 C1QTNF8P60827 252 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 KLF1Q13351 362 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 E2F2Q14209 437 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 KLHL22Q53GT1 634 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 GPR153Q6NV75 609 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ZCCHC10Q8TBK6 192 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CD99L2Q8TCZ2 262 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 PIK3R3Q92569 461 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 TOP1MTQ969P6 601 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 RAB11FIP5Q9BXF6 653 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 PRRG4Q9BZD6 226 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SLC17A6Q9P2U8 582 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SNX7Q9UNH6 387 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CDH1P12830 882 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CRISP3P54108 245 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CARD16Q5EG05 197 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 NANOGNBQ7Z5D8 188 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 AMZ2Q86W34 360 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 FAM129CQ86XR2 697 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 WFIKKN2Q8TEU8 576 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 IPCEF1Q8WWN9 437 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 EFHD2Q96C19 240 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ITM2CQ9NQX7 267 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ATRNL1Q5VV63 1379 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 A0A1W2PRB8 838 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF99A8MXY4 864 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CXorf49A8MYA2 514 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 NOBOXO60393 691 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SNX4O95219 450 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CSKP41240 450 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CBX5P45973 191 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ARHGDIBP52566 201 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 NFKB2Q00653 900 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 MXD1Q05195 221 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 FBXL22Q6P050 247 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 POLR2J3Q9H1A7 115 aaKnown RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SP140LQ9H930 580 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF879B4DU55 563 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 C9IYK1 514 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 HSD17B2P37059 387 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 GJA9P57773 515 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ARF5P84085 180 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 HSF2Q03933 536 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 PPIGQ13427 754 aaKnown RBP eCLIP15.74■□□□□ 0.111e-8■■■■□ 22.6
COL2A1-202ENST00000380518 RNF19BQ6ZMZ0 732 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 MED28Q9H204 178 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 DPEP2Q9H4A9 486 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 SUV39H2Q9H5I1 410 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ZDHHC3Q9NYG2 299 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TVP23BQ9NYZ1 205 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TMEM59LQ9UK28 342 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 A0A1W2PQ72 361 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 PITPNM1O00562 1244 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TBX10O75333 385 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 RGS20O76081 388 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 SIX3O95343 332 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF12P17014 697 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CPN2P22792 545 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ARHGAP1Q07960 439 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 PUDPQ08623 228 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 VITQ6UXI7 678 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 PACRGLQ8N7B6 248 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 COX18Q8N8Q8 333 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CEP295NLQ96MC4 621 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TAPBPLQ9BX59 468 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 OR2AG1Q9H205 316 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 FAM172BPA6NC97 362 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ITM2AO43736 263 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 ECI2O75521 394 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TBX18O95935 607 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 NRLP54845 237 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 SLC30A6Q6NXT4 461 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 TNFAIP8L2Q6P589 184 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CCDC80Q76M96 950 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 C12orf66Q96MD2 445 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CAMK1GQ96NX5 476 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 SRMSQ9H3Y6 488 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 AKTIPQ9H8T0 292 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 USP29Q9HBJ7 922 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 THUMPD1Q9NXG2 353 aaKnown RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 VPS29Q9UBQ0 182 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 HEBP2Q9Y5Z4 205 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 FER1L4A9Z1Z3 1794 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 AP1S2P56377 157 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 EIPR1Q53HC9 387 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CNPPD1Q9BV87 410 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 CACNG4Q9UBN1 327 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 RPL36Q9Y3U8 105 aaKnown RBP15.74■□□□□ 0.11
COL2A1-202ENST00000380518 C3P01024 1663 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 NFAT5O94916 1531 aa15.74■□□□□ 0.11
COL2A1-202ENST00000380518 SLC31A1O15431 190 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms