RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 FEM1AQ9BSK4 669 aa7.21□□□□□ -1.25
GPCPD1-201ENST00000379019 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.25
GPCPD1-201ENST00000379019 SCML1Q9UN30 329 aa7.21□□□□□ -1.25
GPCPD1-201ENST00000379019 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.25
GPCPD1-201ENST00000379019 UGT2B11O75310 529 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 WBP4O75554 376 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 IPO13O94829 963 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PEPDP12955 493 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TACR1P25103 407 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SGSHP51688 502 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 IFRD2Q12894 506 aaPredicted RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TBCCQ15814 346 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 CCDC85BQ15834 202 aaPredicted RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 DTX3Q8N9I9 347 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SMG7Q92540 1137 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 HDAC11Q96DB2 347 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MROQ9BYG7 248 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PLGRKTQ9HBL7 147 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 RLIMQ9NVW2 624 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 UTP6Q9NYH9 597 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 WNT16Q9UBV4 365 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MTCL1Q9Y4B5 1905 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 HEATR9A2RTY3 570 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SMIM30A4D0T7 59 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 KPNA7A9QM74 516 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MYO1DO94832 1006 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PRR35P0CG20 571 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 HGFP14210 728 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 CLK3P49761 638 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TKTL1P51854 596 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ZXDAP98168 799 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 LIPEQ05469 1076 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 NEPROQ6NW34 567 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 KLHDC8BQ8IXV7 354 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ANKRD52Q8NB46 1076 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 WBP2Q969T9 261 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ELSPBP1Q96BH3 223 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 HOXD1Q9GZZ0 328 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 FBXO5Q9UKT4 447 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SLC8A2Q9UPR5 921 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PCDHB14Q9Y5E9 798 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PCDHGA10Q9Y5H3 936 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 DIDO1Q9BTC0 2240 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 CCDC162PA2VCL2 907 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TGM5O43548 720 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 UGT2B4P06133 528 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ATXN1LP0C7T5 689 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MLNP12872 115 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 CD1DP15813 335 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MAP7Q14244 749 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SYT16Q17RD7 645 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 FAM83EQ2M2I3 478 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 PAGE2BQ5JRK9 111 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 KRT80Q6KB66 452 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 BLOC1S3Q6QNY0 202 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SUSD1Q6UWL2 747 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MAMSTRQ6ZN01 415 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SFRP1Q8N474 314 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 B3GALNT2Q8NCR0 500 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 C7orf57Q8NEG2 295 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 DYNC2LI1Q8TCX1 351 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 LKAAEAR1Q8TD35 194 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TWIST2Q8WVJ9 160 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 VPS50Q96JG6 964 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SENP8Q96LD8 212 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 RNF145Q96MT1 663 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ZNF300Q96RE9 604 aaPredicted RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 TRIM62Q9BVG3 475 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 GPR62Q9BZJ7 368 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 IGFLR1Q9H665 355 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SDR39U1Q9NRG7 319 aaPredicted RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 SNX6Q9UNH7 406 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 ANKRD6Q9Y2G4 727 aa7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 MRPS17Q9Y2R5 130 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-201ENST00000379019 CASTOR2A6NHX0 329 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 ERI2A8K979 691 aaKnown RBP7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 FAM227AF5H4B4 570 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 DFFAO00273 331 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 PRMT5O14744 637 aaPredicted RBP7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 SEMA7AO75326 666 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 SEMA3DO95025 777 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 ARSFP54793 590 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 SLC12A2P55011 1212 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 GALNT3Q14435 633 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 KDELC1Q6UW63 502 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 SLC2A13Q96QE2 648 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 FAF1Q9UNN5 650 aaPredicted RBP7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 NOTCH4Q99466 2003 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 HIDE1A8MVS5 230 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 MAN2B1O00754 1011 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 RPS9P46781 194 aaKnown RBP7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 ERVPABLB-1P60509 514 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 HOXC5Q00444 222 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 PIK3R6Q5UE93 754 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 PAQR3Q6TCH7 311 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 BCDIN3DQ7Z5W3 292 aaKnown RBP7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 VTCN1Q7Z7D3 282 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 B3GNT8Q7Z7M8 397 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 ANKRD46Q86W74 232 aa7.2□□□□□ -1.26
GPCPD1-201ENST00000379019 CILP2Q8IUL8 1156 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms