RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SLC25A37Q9NYZ2 338 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 USE1Q9NZ43 259 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 AGO1Q9UL18 857 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ACTL7AQ9Y615 435 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 NDST3O95803 873 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 DLGAP3O95886 979 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 GRIK2Q13002 908 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 PWP1Q13610 501 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 IL27RAQ6UWB1 636 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 GPRIN3Q6ZVF9 776 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 DPP9Q86TI2 863 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SVIPQ8NHG7 77 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 JPH3Q8WXH2 748 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 LGALS12Q96DT0 336 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 RDH12Q96NR8 316 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 GAD1Q99259 594 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 RIBC2Q9H4K1 309 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CATSPERZQ9NTU4 200 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 IL37Q9NZH6 218 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 GBF1Q92538 1859 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SYNDIG1LA6NDD5 238 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CASTOR2A6NHX0 329 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 E2F3O00716 465 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 C1QCP02747 245 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 PIK3CGP48736 1102 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 MRPL19P49406 292 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SUZ12Q15022 739 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 PON2Q15165 354 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 LRRTM3Q86VH5 581 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 POC5Q8NA72 575 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SIDT2Q8NBJ9 832 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 LPPQ93052 612 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 ASPSCR1Q9BZE9 553 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 NMUR1Q9HB89 426 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 A0A0U1RQS6 177 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CXCR6O00574 342 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SSX4O60224 188 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 UPK1BO75841 260 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CHEK2O96017 543 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 B3GALT4O96024 378 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP11A1P05108 521 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CAPN1P07384 714 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 STC1P52823 247 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 PPP5CP53041 499 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC35A2P78381 396 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 KIAA1614Q5VZ46 1190 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CEP68Q76N32 757 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 HASPINQ8TF76 798 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 CSNK1G1Q9HCP0 422 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 FNDC3AQ9Y2H6 1198 aaKnown RBP11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 IFT52Q9Y366 437 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 ANKRD36A6QL64 1941 aa11.28□□□□□ -0.6
TM9SF2-201ENST00000376387 OTOFQ9HC10 1997 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 NUAK1O60285 661 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 OR1I1O60431 355 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 DIRAS1O95057 198 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 SMIM10L2AP0DMW4 78 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 SMIM10L2BP0DMW5 78 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 HOXD8P13378 290 aaPredicted RBP11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 TGFBR2P37173 567 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 RENBPP51606 427 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 ABRAXAS2Q15018 415 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 SYT16Q17RD7 645 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 CARD16Q5EG05 197 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 DESI1Q6ICB0 168 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 MCFD2Q8NI22 146 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 NCLNQ969V3 563 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 NUSAP1Q9BXS6 441 aaKnown RBP11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 DERL2Q9GZP9 239 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 KATNBL1Q9H079 304 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 OSGIN1Q9UJX0 560 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 C3orf18Q9UK00 162 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 PKP3Q9Y446 797 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 PCDHGB1Q9Y5G3 927 aa11.27□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC16A6O15403 523 aa11.27□□□□□ -0.61
TM9SF2-201ENST00000376387 LILRB3O75022 631 aa11.27□□□□□ -0.61
TM9SF2-201ENST00000376387 NIPSNAP2O75323 286 aa11.27□□□□□ -0.61
TM9SF2-201ENST00000376387 RFPL2O75678 378 aa11.27□□□□□ -0.61
TM9SF2-201ENST00000376387 SERPINA1P01009 418 aa11.27□□□□□ -0.61
TM9SF2-201ENST00000376387 RYKP34925 604 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms