RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MAD2L1Q13257 205 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 VPS26BQ4G0F5 336 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SAMD4BQ5PRF9 694 aaKnown RBP17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PIP5KL1Q5T9C9 394 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RAET1GQ6H3X3 334 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GALNT13Q8IUC8 556 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MINDY1Q8N5J2 469 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 L3MBTL4Q8NA19 623 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CXorf40AQ8TE69 158 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PYDC1Q8WXC3 89 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZNF514Q96K75 400 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LINC00615Q96LM1 132 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RIPOR3Q96MK2 946 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C1orf50Q9BV19 199 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NMRK1Q9NWW6 199 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ASIC5Q9NY37 505 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ADA2Q9NZK5 511 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ABCD2Q9UBJ2 740 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CD300AQ9UGN4 299 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 STON1Q9Y6Q2 735 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 COL4A2P08572 1712 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KCNE1BA0A087WTH5 132 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ARHGEF33A8MVX0 844 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 K7ESM1 405 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LIN7AO14910 233 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NVLO15381 856 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 AP1G1O43747 822 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ULK1O75385 1050 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 EEDO75530 441 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KRT6AP02538 564 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KRT6BP04259 564 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KRT6CP48668 564 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CNTN1Q12860 1018 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 AP5B1Q2VPB7 878 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PTCHD3Q3KNS1 767 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SPATS1Q496A3 300 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ATL1Q8WXF7 558 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TEX37Q96LM6 180 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RSPH9Q9H1X1 276 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ACTR8Q9H981 624 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRIM39Q9HCM9 518 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DNAJC11Q9NVH1 559 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GID8Q9NWU2 228 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KLQ9UEF7 1012 aa17.56■□□□□ 0.4
HLA-DQB1-201ENST00000374943 H3BNX3 289 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FXYD1O00168 92 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CATP04040 527 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MAP4P27816 1152 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ERFP50548 548 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 POLR2JP52435 117 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 UFM1P61960 85 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MS4A2Q01362 244 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRAP1Q12931 704 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CAMK2GQ13555 558 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRIM25Q14258 630 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZFP1Q6P2D0 407 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NEK5Q6P3R8 708 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DHDDSQ86SQ9 333 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZFAND4Q86XD8 727 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FBXO15Q8NCQ5 510 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PPFIBP2Q8ND30 876 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PROKR1Q8TCW9 393 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CCDC138Q96M89 665 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZNF490Q9ULM2 529 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SERTM1A2A2V5 107 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ANTXRLA6NF34 631 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NPIPB8E9PQR5 432 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 IFRD1O00458 451 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FFAR3O14843 346 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ANKRD28O15084 1053 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GPR42O15529 346 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MAP3K7O43318 606 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 VEGFDO43915 354 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 UGDHO60701 494 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 JAK1P23458 1154 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 BMP8BP34820 402 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DRD3P35462 400 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MTHFRP42898 656 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TNFRSF4P43489 277 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PREPP48147 710 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PFN3P60673 137 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PRKG2Q13237 762 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TLDC1Q6P9B6 456 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CYP20A1Q6UW02 462 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ADAMTSL4Q6UY14 1074 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MTSS1LQ765P7 747 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 HBEGFQ99075 208 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 OR2AG1Q9H205 316 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GULP1Q9UBP9 304 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LEF1Q9UJU2 399 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SNX6Q9UNH7 406 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GPR34Q9UPC5 381 aa17.55■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C17orf113A0A1B0GUU1 675 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ASPDHA6ND91 283 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PRORSD1PA6NEY8 169 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ADH1BP00325 375 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PRPH2P23942 346 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 IL12AP29459 219 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms