RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SNRNP200O75643 2136 aaKnown RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 KRT37O76014 449 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 UBXN7O94888 489 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 C8GP07360 202 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 SNRPAP09012 282 aaKnown RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 AMD1P17707 334 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 MAGEA12P43365 314 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 CFHR1Q03591 330 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 SP140Q13342 867 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 BMPR2Q13873 1038 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 SPIDRQ14159 915 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 PLCL1Q15111 1095 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 RASA2Q15283 850 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 AMZ1Q400G9 498 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 N4BP2L1Q5TBK1 243 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 TMEM71Q6P5X7 295 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 WDR74Q6RFH5 385 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 RBM44Q6ZP01 1051 aaKnown RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 DGLUCYQ7Z3D6 616 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 PIWIL4Q7Z3Z4 852 aaKnown RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 RAB44Q7Z6P3 723 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 TMPRSS12Q86WS5 348 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 OR52E1Q8NGJ3 308 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 ANKRD49Q8WVL7 239 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 LCN9Q8WX39 176 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 LINGO1Q96FE5 620 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 AHCYL2Q96HN2 611 aaKnown RBP11.04□□□□□ -0.64
HSPG2-202ENST00000374676 UBXN10Q96LJ8 280 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 HGH1Q9BTY7 390 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 SLC12A9Q9BXP2 914 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 DERL2Q9GZP9 239 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 TWSG1Q9GZX9 223 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 PDP2Q9P2J9 529 aa11.04□□□□□ -0.64
HSPG2-202ENST00000374676 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 OR5K3A6NET4 321 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TRIM49D1C9J1S8 452 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 D6RAR5 112 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TMX2-CTNND1H3BSU7 103 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MYO1CO00159 1063 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 CASC3O15234 703 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MT-CO3P00414 261 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ALDOAP04075 364 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SHBGP04278 402 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 C2P06681 752 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SLC35E2BP0CK96 405 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 CCDC166P0CW27 439 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TYRP1P17643 537 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 CYP2A7P20853 494 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MAP4P27816 1152 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TYK2P29597 1187 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SHMT2P34897 504 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 HSD17B2P37059 387 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 CAPZBP47756 277 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SERPINB8P50452 374 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 RAB28P51157 221 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ATP6V0D1P61421 351 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ZNF460Q14592 562 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 NKAIN2Q5VXU1 208 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TIFABQ6ZNK6 161 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 USP53Q70EK8 1073 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 UBE2R2Q712K3 238 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TMPRSS7Q7RTY8 843 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 CMC1Q7Z7K0 106 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 AMIGO1Q86WK6 493 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 PLXDC1Q8IUK5 500 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 GALNT15Q8N3T1 639 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 DCBLD1Q8N8Z6 715 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MYRIPQ8NFW9 859 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 OR4E2Q8NGC2 313 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 OR9A1PQ8NGU1 263 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MCOLN3Q8TDD5 553 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 NCSTNQ92542 709 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 MENTQ9BUN1 341 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 RAB11FIP5Q9BXF6 653 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ROPN1BQ9BZX4 212 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SRMSQ9H3Y6 488 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ROPN1Q9HAT0 212 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SNX15Q9NRS6 342 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 HRASLS2Q9NWW9 162 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 OR6C2Q9NZP2 312 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 SPATA7Q9P0W8 599 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 PSMC3IPQ9P2W1 217 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TLK1Q9UKI8 766 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ATXN7L1Q9ULK2 861 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ICKQ9UPZ9 632 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 RUVBL2Q9Y230 463 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
HSPG2-202ENST00000374676 ACOT9Q9Y305 439 aa11.03□□□□□ -0.64
HSPG2-202ENST00000374676 HEATR5BQ9P2D3 2071 aa11.02□□□□□ -0.64
HSPG2-202ENST00000374676 A0A087X1B8 175 aa11.02□□□□□ -0.65
HSPG2-202ENST00000374676 CCDC189A1A4V9 331 aa11.02□□□□□ -0.65
HSPG2-202ENST00000374676 OR6C74A6NCV1 312 aa11.02□□□□□ -0.65
HSPG2-202ENST00000374676 MATN2O00339 956 aa11.02□□□□□ -0.65
HSPG2-202ENST00000374676 BTN3A3O00478 584 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms