RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ULK4Q96C45 1275 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 RHBDF1Q96CC6 855 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 MAGEB10Q96LZ2 347 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 SEPHS2Q99611 448 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 TUBA1CQ9BQE3 449 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 TRIM8Q9BZR9 551 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 TM6SF2Q9BZW4 377 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 LRTM1Q9HBL6 345 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 ELOVL2Q9NXB9 296 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 SLAMF8Q9P0V8 285 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 CIDEBQ9UHD4 219 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 GREM1O60565 184 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ANXA5P08758 320 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CTSAP10619 480 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 BPIP17213 487 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 NSG1P42857 185 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 HNRNPFP52597 415 aaKnown RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CDH15P55291 814 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DAG1Q14118 895 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 C18orf21Q32NC0 220 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 LRRC23Q53EV4 343 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MPPE1Q53F39 396 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DHRS4L2Q6PKH6 230 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 TPGS1Q6ZTW0 290 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 LRRC70Q7Z2Q7 622 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 RALGPS2Q86X27 583 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 LKAAEAR1Q8TD35 194 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 USP7Q93009 1102 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 RAD9AQ99638 391 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 APOL5Q9BWW9 433 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ZDHHC3Q9NYG2 299 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 KLQ9UEF7 1012 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CPQQ9Y646 472 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 PRSS21Q9Y6M0 314 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 AGAP14A8MT82 685 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 TEX28O15482 410 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 STK16O75716 305 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 GUCA1CO95843 209 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 GNAO1P09471 354 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 PRPS2P11908 318 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ITGB6P18564 788 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 NFKBIAP25963 317 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MAPK1P28482 360 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 HNF1BP35680 557 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 HLCSP50747 726 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DGKQP52824 942 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ARSFP54793 590 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MTPNP58546 118 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 HPCAP84074 193 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 PTPRRQ15256 657 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CHRNA6Q15825 494 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MAPKAPK3Q16644 382 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 GGTA1PQ4G0N0 100 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 GTF2H4Q92759 462 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 TMIGD2Q96BF3 282 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 FBXL20Q96IG2 436 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF583Q96ND8 569 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 BOCQ9BWV1 1114 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 NPLQ9BXD5 320 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CLMPQ9H6B4 373 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 MAGIXQ9H6Y5 334 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ABCB8Q9NUT2 735 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DDX18Q9NVP1 670 aaKnown RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 C1orf109Q9NX04 203 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 TMEM9Q9P0T7 183 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 DNAJB9Q9UBS3 223 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 RAPGEFL1Q9UHV5 662 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-203ENST00000374490 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
HMGCL-203ENST00000374490 CHD9Q3L8U1 2897 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 GPR39O43194 453 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
HMGCL-203ENST00000374490 CLDN7O95471 211 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 C8GP07360 202 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 THRBP10828 461 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 ACPPP15309 386 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 IL1RNP18510 177 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 GGT5P36269 586 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 SNRPD1P62314 119 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms