RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 KIF18AQ8NI77 898 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 KLHL6Q8WZ60 621 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 TEFMQ96QE5 360 aaKnown RBP11.67□□□□□ -0.54
HDAC8-201ENST00000373554 MAP3K3Q99759 626 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 WDR83Q9BRX9 315 aaKnown RBP11.67□□□□□ -0.54
HDAC8-201ENST00000373554 ZPBPQ9BS86 351 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 DPH1Q9BZG8 443 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 XKR8Q9H6D3 395 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
HDAC8-201ENST00000373554 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 POMT2Q9UKY4 750 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 ICKQ9UPZ9 632 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 MAST4O15021 2626 aa11.67□□□□□ -0.54
HDAC8-201ENST00000373554 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 STMND1H3BQB6 276 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 BTN3A3O00478 584 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 POLR1CO15160 346 aaPredicted RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 EIF3HO15372 352 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 KLK10O43240 276 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 VPS26AO75436 327 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 ZBTB11O95625 1053 aaPredicted RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 F7P08709 466 aaPredicted RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 LIPCP11150 499 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 NELFEP18615 380 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 CDH3P22223 829 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 CARSP49589 748 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 KPNA2P52292 529 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 FRG1Q14331 258 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 FASTKD3Q14CZ7 662 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 STEAP4Q687X5 459 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 SPACA3Q8IXA5 215 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 RAB42Q8N4Z0 105 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 SIDT2Q8NBJ9 832 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 MAGEC3Q8TD91 643 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 PYROXD1Q8WU10 500 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 HNRNPLLQ8WVV9 542 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 SLC41A2Q96JW4 573 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 SOHLH2Q9NX45 425 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 GRHL1Q9NZI5 618 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 OR6C2Q9NZP2 312 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 ZFATQ9P243 1243 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 SEMA5BQ9P283 1151 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
HDAC8-201ENST00000373554 B3GALT1Q9Y5Z6 326 aa11.66□□□□□ -0.54
HDAC8-201ENST00000373554 FLNBO75369 2602 aaKnown RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PIPSLA2A3N6 862 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CTAGE15A4D2H0 777 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 MAP3K7O43318 606 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 HAUS5O94927 633 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CHRM5P08912 532 aaPredicted RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CTAGE8P0CG41 777 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 ITPKBP27987 946 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PRDX3P30048 256 aaKnown RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CCNFP41002 786 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 RAB28P51157 221 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CLCN7P51798 805 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PLTPP55058 493 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 UCNP55089 124 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 HSD11B2P80365 405 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 TLE3Q04726 772 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CBLBQ13191 982 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CLN3Q13286 438 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 TUBB3Q13509 450 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 GBX1Q14549 363 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 IL11RAQ14626 422 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 UGT3A1Q6NUS8 523 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 ZNF549Q6P9A3 640 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 TRMT10BQ6PF06 316 aaKnown RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 GALNT7Q86SF2 657 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CTAGE6Q86UF2 777 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 ZFAND4Q86XD8 727 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CTAGE4Q8IX94 777 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 ADGRF3Q8IZF5 1079 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 RAD51AP1Q96B01 352 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 OR6C1Q96RD1 312 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 GPR21Q99679 349 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CTRCQ99895 268 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 AARSD1Q9BTE6 412 aaKnown RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PLAC1Q9HBJ0 212 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 SAYSD1Q9NPB0 183 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 C1GALT1Q9NS00 363 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 KLHL42Q9P2K6 505 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 PLAGL1Q9UM63 463 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 RUVBL2Q9Y230 463 aaKnown RBP11.65□□□□□ -0.54
HDAC8-201ENST00000373554 NFS1Q9Y697 457 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.54
HDAC8-201ENST00000373554 CATP04040 527 aaKnown RBP11.64□□□□□ -0.55
HDAC8-201ENST00000373554 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
HDAC8-201ENST00000373554 CD9P21926 228 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 PKLRP30613 574 aa11.64□□□□□ -0.55
HDAC8-201ENST00000373554 BDKRB1P46663 353 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms