RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CLCN2P51788 898 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 NEK2P51955 445 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 MAD2L1Q13257 205 aaPredicted RBP18.3■□□□□ 0.52
USP49-202ENST00000373010 GBX1Q14549 363 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 PYCR3Q53H96 274 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 CACHD1Q5VU97 1274 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 BEND7Q8N7W2 519 aaPredicted RBP18.3■□□□□ 0.52
USP49-202ENST00000373010 ASB11Q8WXH4 323 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 NCSTNQ92542 709 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 GTF2H4Q92759 462 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 RNF145Q96MT1 663 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 SLC29A3Q9BZD2 475 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 EPB41L1Q9H4G0 881 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 C1orf109Q9NX04 203 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 PKD2L2Q9NZM6 624 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 FAM8A1Q9UBU6 413 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 ERVW-1Q9UQF0 538 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 WNT6Q9Y6F9 365 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 KIAA0355O15063 1070 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 RHOP08100 348 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 FCGR1AP12314 374 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 WEE1P30291 646 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 RECQLP46063 649 aaPredicted RBP18.3■□□□□ 0.52
USP49-202ENST00000373010 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
USP49-202ENST00000373010 PRR23BQ6ZRT6 265 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 RNF165Q6ZSG1 346 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 Q6ZVL8 140 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 SPRED1Q7Z699 444 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 TBC1D21Q8IYX1 336 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 FAM47BQ8NA70 645 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 ZNF583Q96ND8 569 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 IKZF5Q9H5V7 419 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 MAGEL2Q9UJ55 1249 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 NOTCH4Q99466 2003 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 NUAK1O60285 661 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 LEFTY1O75610 366 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 KRT6AP02538 564 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 KRT6BP04259 564 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 BCKDHAP12694 445 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 RPL10P27635 214 aaKnown RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 KRT6CP48668 564 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 POLR2LP62875 67 aaKnown RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 MAPKAPK3Q16644 382 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 SMU1Q2TAY7 513 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 PTCHD3Q3KNS1 767 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 POM121L1PQ3SYA9 428 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 USP39Q53GS9 565 aaKnown RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 ARSIQ5FYB1 569 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 ZDHHC20Q5W0Z9 365 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 TSPAN14Q8NG11 270 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 CLP1Q92989 425 aaKnown RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 NMD3Q96D46 503 aaKnown RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 ZSWIM3Q96MP5 696 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 P2RY13Q9BPV8 354 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 CHID1Q9BWS9 393 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 PNPLA3Q9NST1 481 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 NDUFA13Q9P0J0 144 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 DLGAP4Q9Y2H0 992 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 KANSL1LA0AUZ9 987 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 EI24O14681 340 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 VILLO15195 856 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 H6PDO95479 791 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 C8GP07360 202 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 HIST1H2AGP0C0S8 130 aaPredicted RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 PTPN2P17706 415 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 HIST1H2ADP20671 130 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 ETV3P41162 512 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 EPHA5P54756 1037 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 NEK5Q6P3R8 708 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 ELMSAN1Q6PJG2 1045 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 MSRB3Q8IXL7 192 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 SELENOMQ8WWX9 145 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 HIST1H2AHQ96KK5 128 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 HIST1H2AJQ99878 128 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 HEPHQ9BQS7 1158 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 H2AFJQ9BTM1 129 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 ADI1Q9BV57 179 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 FAM83DQ9H4H8 585 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 CLMPQ9H6B4 373 aa18.29■□□□□ 0.52
USP49-202ENST00000373010 CXXC1Q9P0U4 656 aaPredicted RBP18.29■□□□□ 0.52
USP49-202ENST00000373010 KIAA0100Q14667 2235 aaKnown RBP18.28■□□□□ 0.52
USP49-202ENST00000373010 WASH3PC4AMC7 463 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 H3BNH8 94 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 RASAL1O95294 804 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 PGRP06401 933 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 ITPKAP23677 461 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 NFKBIAP25963 317 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 VIPR1P32241 457 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 GTDC1Q4AE62 458 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 ARHGAP15Q53QZ3 475 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 CDKL4Q5MAI5 379 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 TMTC4Q5T4D3 741 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 LRRC70Q7Z2Q7 622 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 MRPL43Q8N983 215 aaKnown RBP18.28■□□□□ 0.52
USP49-202ENST00000373010 OR8J3Q8NGG0 315 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 DGCR14Q96DF8 476 aaKnown RBP18.28■□□□□ 0.52
USP49-202ENST00000373010 VPS50Q96JG6 964 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 PCDH12Q9NPG4 1184 aa18.28■□□□□ 0.52
USP49-202ENST00000373010 SLC25A37Q9NYZ2 338 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms