RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 VCLP18206 1134 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 RECQLP46063 649 aaPredicted RBP13.79□□□□□ -0.2
LDB3-204ENST00000372066 AGTR2P50052 363 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 MRPS21P82921 87 aaKnown RBP13.79□□□□□ -0.2
LDB3-204ENST00000372066 SHC2P98077 582 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 TRIP10Q15642 601 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 GAB4Q2WGN9 574 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 GPRC6AQ5T6X5 926 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 PAOXQ6QHF9 649 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 RNF111Q6ZNA4 994 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 KIAA0907Q7Z7F0 614 aaPredicted RBP13.79□□□□□ -0.2
LDB3-204ENST00000372066 ZSWIM9Q86XI8 627 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 AHI1Q8N157 1196 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 GOLM1Q8NBJ4 401 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 HIPK4Q8NE63 616 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 LRGUKQ96M69 825 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 KCNA7Q96RP8 456 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 BBS2Q9BXC9 721 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 CXorf56Q9H5V9 222 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 SPHK2Q9NRA0 654 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 NFKBIL1Q9UBC1 381 aaPredicted RBP13.79□□□□□ -0.2
LDB3-204ENST00000372066 ABCD2Q9UBJ2 740 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 PTBP2Q9UKA9 531 aaKnown RBP13.79□□□□□ -0.2
LDB3-204ENST00000372066 ADAMTS6Q9UKP5 1117 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
LDB3-204ENST00000372066 KIF26AQ9ULI4 1882 aaPredicted RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 RALGAPA1Q6GYQ0 2036 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 IFRD1O00458 451 aaPredicted RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 NR5A2O00482 541 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 NPPAP01160 153 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 PCSK2P16519 638 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 BCKDHBP21953 392 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 TIE1P35590 1138 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 STK19P49842 368 aaPredicted RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 NOVA1P51513 510 aaKnown RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 KCNK10P57789 538 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 DCDC1P59894 354 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 CDKL1Q00532 357 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 BNIP2Q12982 314 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 GRB7Q14451 532 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 LRRC66Q68CR7 880 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 PMS2CLQ68D20 193 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 GOLGA7Q7Z5G4 137 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 TCAIMQ8N3R3 496 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 ADCY4Q8NFM4 1077 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 PIP4K2CQ8TBX8 421 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 RPL10LQ96L21 214 aaKnown RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 COPS8Q99627 209 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 GPATCH1Q9BRR8 931 aaKnown RBP13.78□□□□□ -0.2
LDB3-204ENST00000372066 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 TRIM54Q9BYV2 358 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 PKD2L2Q9NZM6 624 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 BTRCQ9Y297 605 aa13.78□□□□□ -0.2
LDB3-204ENST00000372066 C15orf38-AP3S2A0A0A6YYH1 394 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 IQCF5A8MTL0 148 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 NEDD8-MDP1E9PL57 170 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 GPR39O43194 453 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
LDB3-204ENST00000372066 WDR47O94967 919 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 OR4F21O95013 312 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 KAT7O95251 611 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
LDB3-204ENST00000372066 CAPNS1P04632 268 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 APODP05090 189 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
LDB3-204ENST00000372066 OR56A5P0C7T3 313 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
LDB3-204ENST00000372066 GKP32189 559 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.21
LDB3-204ENST00000372066 HSPA13P48723 471 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 ERFP50548 548 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 CLCN2P51788 898 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 MRPS22P82650 360 aaKnown RBP13.77□□□□□ -0.21
LDB3-204ENST00000372066 MS4A2Q01362 244 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 RHDQ02161 417 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 RCAN2Q14206 197 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 GDPD4Q6W3E5 623 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 CYP2U1Q7Z449 544 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 ARPINQ7Z6K5 226 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 TMEM25Q86YD3 366 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 SFTPA1Q8IWL2 248 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 OR9I1Q8NGQ6 314 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 HCAR2Q8TDS4 363 aa13.77□□□□□ -0.21
LDB3-204ENST00000372066 VOPP1Q96AW1 172 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms