RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 PIPSLA2A3N6 862 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 AVILO75366 819 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 TMEM63AO94886 807 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 RORAP35398 523 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 HSPA14Q0VDF9 509 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 GRB7Q14451 532 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 PCID2Q5JVF3 399 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 CTSL3PQ5NE16 218 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 PLEKHS1Q5SXH7 462 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 TMTC4Q5T4D3 741 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 FAM198BQ6UWH4 519 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 SLC22A15Q8IZD6 547 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 DSELQ8IZU8 1212 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 C19orf47Q8N9M1 422 aaKnown RBP12.4□□□□□ -0.42
NR1I3-201ENST00000367979 LINC01555Q8NAE3 123 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 TRIM58Q8NG06 486 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 OR5K2Q8NHB8 316 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 CFAP61Q8NHU2 1237 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 C9orf43Q8TAL5 461 aaPredicted RBP12.4□□□□□ -0.42
NR1I3-201ENST00000367979 APOBEC4Q8WW27 367 aaKnown RBP12.4□□□□□ -0.42
NR1I3-201ENST00000367979 MENTQ9BUN1 341 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 AP1M1Q9BXS5 423 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 EPN3Q9H201 632 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 PCMTD2Q9NV79 361 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 RIMKLBQ9ULI2 386 aa12.4□□□□□ -0.42
NR1I3-201ENST00000367979 DRG1Q9Y295 367 aaKnown RBP12.4□□□□□ -0.42
NR1I3-201ENST00000367979 SNRNP200O75643 2136 aaKnown RBP12.4□□□□□ -0.43
NR1I3-201ENST00000367979 RELNP78509 3460 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 FER1L5A0AVI2 2057 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 MATN2O00339 956 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CD3EAPO15446 510 aaKnown RBP12.39□□□□□ -0.43
NR1I3-201ENST00000367979 GPC4O75487 556 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 MT-ND3P03897 115 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CAPN1P07384 714 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 GSTM1P09488 218 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 PTPN4P29074 926 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 PKLRP30613 574 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 BDKRB1P46663 353 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 GABRA4P48169 554 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 MC1RQ01726 317 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 GSTM4Q03013 218 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 TLE1Q04724 770 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 KCNJ11Q14654 390 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CCSMST1Q4G0I0 132 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CRTC2Q53ET0 693 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-201ENST00000367979 LYPLAL1Q5VWZ2 237 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 ZNF449Q6P9G9 518 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-201ENST00000367979 TBC1D21Q8IYX1 336 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 CARFQ8N187 725 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 ENDOVQ8N8Q3 282 aaKnown RBP12.39□□□□□ -0.43
NR1I3-201ENST00000367979 FAM136AQ96C01 138 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 FCRL4Q96PJ5 515 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-201ENST00000367979 P2RY12Q9H244 342 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 LATS2Q9NRM7 1088 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 KCND3Q9UK17 655 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 MAN2B2Q9Y2E5 1009 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 PCDHB3Q9Y5E6 796 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
NR1I3-201ENST00000367979 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 C21orf140B9A014 251 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 H3BMH7 237 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 MEN1O00255 615 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 QSOX1O00391 747 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 ZNF749O43361 778 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 NRP2O60462 931 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 SFTPCP11686 197 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 CYP2A7P20853 494 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 AOAHP28039 575 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 SHMT2P34897 504 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 ATG14Q6ZNE5 492 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 BPHLQ86WA6 291 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 SYTL1Q8IYJ3 562 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 AGGF1Q8N302 714 aaeCLIP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 CLIP3Q96DZ5 547 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 SGSM3Q96HU1 749 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-201ENST00000367979 FANCEQ9HB96 536 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 GALPQ9UBC7 116 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 TLK1Q9UKI8 766 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 POLHQ9Y253 713 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
NR1I3-201ENST00000367979 SPTBP11277 2137 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 A0A0J9YY10 115 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 ARGFXA6NJG6 315 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 ISM1B1AKI9 464 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 PRMT5O14744 637 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-201ENST00000367979 NIPSNAP2O75323 286 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 VAPBO95292 243 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 WISP1O95388 367 aa12.37□□□□□ -0.43
NR1I3-201ENST00000367979 CBSLP0DN79 551 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms