RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SLC26A1Q9H2B4 701 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CLSTN2Q9H4D0 955 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 NPDC1Q9NQX5 325 aaPredicted RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 SAMSN1Q9NSI8 373 aaKnown RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 ACTR10Q9NZ32 417 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CTSFQ9UBX1 484 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 SPO11Q9Y5K1 396 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 PMPCBO75439 489 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 SLCO2B1O94956 709 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 ONECUT2O95948 504 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 ALBP02768 609 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 RARAP10276 462 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 CCNCP24863 283 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 PCK1P35558 622 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 LDLRAP1Q5SW96 308 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 GPRC6AQ5T6X5 926 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 KBTBD2Q8IY47 623 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 SIRT6Q8N6T7 355 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 OR52E1Q8NGJ3 308 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 THAP3Q8WTV1 239 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-202ENST00000367740 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
VAMP4-202ENST00000367740 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 TSGA13Q96PP4 275 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 ZNF559Q9BR84 538 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 CHRNA10Q9GZZ6 450 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 IL26Q9NPH9 171 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 HEBP2Q9Y5Z4 205 aa14.06□□□□□ -0.16
VAMP4-202ENST00000367740 A0A1B0GX78 115 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 FOXO6A8MYZ6 492 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A9O60656 530 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 WDPCPO95876 746 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 PRR35P0CG20 571 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A6P19224 532 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A1P22309 533 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 ALAS2P22557 587 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 IFI16Q16666 785 aaKnown RBP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 SLC5A12Q1EHB4 618 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 FAM182AQ5T1J6 154 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 NCBP2-AS2Q69YL0 99 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 DNAAF3Q8N9W5 541 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 AGAP11Q8TF27 550 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 GPR137Q96N19 417 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 DMRTA2Q96SC8 542 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 XKR8Q9H6D3 395 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A7Q9HAW7 530 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A10Q9HAW8 530 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A8Q9HAW9 530 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 IRAK4Q9NWZ3 460 aa14.05□□□□□ -0.16
VAMP4-202ENST00000367740 NXT1Q9UKK6 140 aaKnown RBP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
VAMP4-202ENST00000367740 ADAM10O14672 748 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 PRAMEF1O95521 474 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 POLBP06746 335 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 ACPPP15309 386 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 UGT2B7P16662 529 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 ADAM8P78325 824 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 TFF3Q07654 80 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 PAFAH1B3Q15102 231 aaKnown RBP14.04□□□□□ -0.16
VAMP4-202ENST00000367740 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 HIBCHQ6NVY1 386 aaPredicted RBP14.04□□□□□ -0.16
VAMP4-202ENST00000367740 FAM151BQ6UXP7 276 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 C3P1Q6ZMU1 363 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 TTLL10Q6ZVT0 673 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 AMIGO1Q86WK6 493 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 DMRTC2Q8IXT2 367 aaPredicted RBP14.04□□□□□ -0.16
VAMP4-202ENST00000367740 CNTD1Q8N815 330 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 DTX3LQ8TDB6 740 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 DLG3Q92796 817 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 C8orf44Q96CB5 159 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 ARSGQ96EG1 525 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 RNF32Q9H0A6 362 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 LIME1Q9H400 295 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 TAB2Q9NYJ8 693 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 ST6GALNAC2Q9UJ37 374 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 ATRQ13535 2644 aa14.04□□□□□ -0.16
VAMP4-202ENST00000367740 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 GAPDHSO14556 408 aaPredicted RBP14.03□□□□□ -0.16
VAMP4-202ENST00000367740 MAP2K7O14733 419 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 ZNHIT1O43257 154 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 ZRANB2O95218 330 aaKnown RBP eCLIP14.03□□□□□ -0.16
VAMP4-202ENST00000367740 CD48P09326 243 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 FDXRP22570 491 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 HMGCLP35914 325 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 ZBTB17Q13105 803 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 PCOLCEQ15113 449 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 PCSK7Q16549 785 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 DNAJC22Q8N4W6 341 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 FLVCR1-AS1Q8TAF5 88 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 SUN3Q8TAQ9 357 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms