RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 OR4F21O95013 312 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 PRH1P02810 166 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ARL2P36404 184 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ARRB1P49407 418 aaPredicted RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 CDKL1Q00532 357 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 RNF19BQ6ZMZ0 732 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ILDR1Q86SU0 546 aaPredicted RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 PLD5Q8N7P1 536 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 EPYCQ99645 322 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 A8MUA0 341 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 GNB5O14775 395 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 COQ9O75208 318 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ACP5P13686 325 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 LIMK2P53671 638 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 CLEC6AQ6EIG7 209 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 FOXR2Q6PJQ5 311 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 L7N2F9 121 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 VAMP2P63027 116 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ECT2LQ008S8 904 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 CEP97Q8IW35 865 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 CELF5Q8N6W0 485 aaKnown RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 PSMG2Q969U7 264 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 MED28Q9H204 178 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ALG2Q9H553 416 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 INSL6Q9Y581 213 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 H3BUI4 141 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TNFRSF10BO14763 440 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TGFB1I1O43294 461 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TPST2O60704 377 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TACSTD2P09758 323 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 CHAF1BQ13112 559 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 VGLL2Q8N8G2 317 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 DNAJB8Q8NHS0 232 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 CCDC59Q9P031 241 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 EIF2B4Q9UI10 523 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TESMINQ9Y4I5 508 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 IRAK2O43187 625 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 CPNE3O75131 537 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF8P17098 575 aaPredicted RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 MECP2P51608 486 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 NFATC2Q13469 925 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 GDPD4Q6W3E5 623 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 PQLC1Q8N2U9 271 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 AGAP11Q8TF27 550 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 NXPE2Q96DL1 559 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 CLPTM1LQ96KA5 538 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 FZD10Q9ULW2 581 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 KLRG2A4D1S0 409 aaPredicted RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 EDF1O60869 148 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 MAP3K8P41279 467 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TMEM17Q86X19 198 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 TMEM125Q96AQ2 219 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 FUBP3Q96I24 572 aaKnown RBP eCLIP15.43■□□□□ 0.063e-15■■■□□ 15.3
NUCKS1-201ENST00000367142 RC3H2Q9HBD1 1191 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 PXDNQ92626 1479 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 DAPL1A0PJW8 107 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 KAT7O95251 611 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 LINGO3P0C6S8 592 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 HNRNPDQ14103 355 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 RAB43Q86YS6 212 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 NATD1Q8N6N6 113 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 CAMK1GQ96NX5 476 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ADAP2Q9NPF8 381 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 DKKL1Q9UK85 242 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 MAFBQ9Y5Q3 323 aaPredicted RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 NPIPA5E9PKD4 350 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 YAP1P46937 504 aaKnown RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 MTTPP55157 894 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ENPP2Q13822 863 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ARHGAP40Q5TG30 622 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 USP30Q70CQ3 517 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF717Q9BY31 904 aaPredicted RBP15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 NPIPA1Q9UND3 350 aa15.43■□□□□ 0.06
NUCKS1-201ENST00000367142 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A1W2PRU2 124 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 MUSKO15146 869 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CDC40O60508 579 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■■■■ 30
NUCKS1-201ENST00000367142 TRAPPC6AO75865 159 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 GBE1Q04446 702 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ARSIQ5FYB1 569 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CNKSR3Q6P9H4 555 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 YTHDF3Q7Z739 585 aaKnown RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CPNE9Q8IYJ1 553 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 GLB1L3Q8NCI6 653 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 OR6K6Q8NGW6 343 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A1W2PQ45 241 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A1W2PQY0 241 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SCDO00767 359 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ARL3P36405 182 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 GXYLT1Q4G148 440 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 LINGO2Q7L985 606 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 PLCZ1Q86YW0 608 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 UBE2J2Q8N2K1 259 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CNTD1Q8N815 330 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms