RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NUP85Q9BW27 656 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 TBC1D22BQ9NU19 505 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 BARHL2Q9NY43 387 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 EXOGQ9Y2C4 368 aaKnown RBP3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 TP53BP1Q12888 1972 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 LOC102723996A0A087X1L8 192 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 FEZF1A0PJY2 475 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 OR10H2O60403 315 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 MED24O75448 989 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 MOCS3O95396 460 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 DUS4LO95620 317 aaKnown RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 WDPCPO95876 746 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 GPIP06744 558 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 PORP16435 677 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 GJA1P17302 382 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 PTPN3P26045 913 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 CHAF1BQ13112 559 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 GRAPQ13588 217 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 SQLEQ14534 574 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 WTAPQ15007 396 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 MEA1Q16626 185 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 ITPRIPL2Q3MIP1 535 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 DHRS7BQ6IAN0 325 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMEM173Q86WV6 379 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 TAGAPQ8N103 731 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 EID3Q8N140 333 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 PTPMT1Q8WUK0 201 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 SLC22A18Q96BI1 424 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 MAGED4Q96JG8 741 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 C18orf12Q96KH6 178 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 FNBP1Q96RU3 617 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 ATOH8Q96SQ7 321 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 IWS1Q96ST2 819 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 BTBD10Q9BSF8 475 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 CDK19Q9BWU1 502 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 ATP13A3Q9H7F0 1226 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 ZNF701Q9NV72 531 aaPredicted RBP3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 FLRT3Q9NZU0 649 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 CACNG4Q9UBN1 327 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 ZDHHC2Q9UIJ5 367 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 DAPK2Q9UIK4 370 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 GPR34Q9UPC5 381 aa3.97□□□□□ -1.77
RNU4-28P-201ENST00000364739 IGKV3D-20A0A0C4DH25 116 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 TCERG1O14776 1098 aaKnown RBP3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ARHGEF9O43307 516 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 GFPT2O94808 682 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 SMIM18P0DKX4 95 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 JAK1P23458 1154 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ACTN2P35609 894 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 PDX1P52945 283 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 LPAL2Q16609 132 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 RNASEH2BQ5TBB1 312 aaKnown RBP3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 KRT79Q5XKE5 535 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 PTAR1Q7Z6K3 402 aaPredicted RBP3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 RTN4RL2Q86UN3 420 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF595Q8IYB9 648 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 CDK20Q8IZL9 346 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 AFAP1Q8N556 730 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 DCLK2Q8N568 766 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 NPEPL1Q8NDH3 523 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 OR11H4Q8NGC9 324 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 MOSPD2Q8NHP6 518 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 SUSD6Q92537 303 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ANKRD9Q96BM1 317 aaPredicted RBP3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 NSUN4Q96CB9 384 aaKnown RBP3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 VGLL1Q99990 258 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 SYT11Q9BT88 431 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 CHMP4AQ9BY43 222 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 MMP27Q9H306 513 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 PDE7BQ9NP56 450 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 SLC35C2Q9NQQ7 365 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZDHHC18Q9NUE0 388 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 RNF186Q9NXI6 227 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 PAK5Q9P286 719 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ASIC3Q9UHC3 531 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 RNF215Q9Y6U7 377 aa3.96□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF541Q9H0D2 1346 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 GPR75-ASB3A0A0A6YYF3 556 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 A0A1W2PN81 502 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ANKRD61A6NGH8 418 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 SERINC4A6NH21 518 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 H7C423 109 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF195O14628 629 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 MEIS2O14770 477 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 TOMM70O94826 608 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 DDHD2O94830 711 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 CLDN1O95832 211 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 DPEP1P16444 411 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ALOX12P18054 663 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 CHRNA7P36544 502 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 MAGEA11P43364 429 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 STAT2P52630 851 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 NAP1L1P55209 391 aaKnown RBP3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 PRKCZQ05513 592 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF415Q09FC8 603 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 UGP2Q16851 508 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 SPDYCQ5MJ68 293 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms