RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 TMEM60Q9H2L4 133 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 SLC32A1Q9H598 525 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 ACKR4Q9NPB9 350 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 MARCOQ9UEW3 520 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 L1RE1Q9UN81 338 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 MOKQ9UQ07 419 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 RCE1Q9Y256 329 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 PPP2R2CQ9Y2T4 447 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 SNX13Q9Y5W8 968 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 NAV2Q8IVL1 2488 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 GPR179Q6PRD1 2367 aa-0.54□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZNF541Q9H0D2 1346 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 IGHV3-38A0A0C4DH36 116 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 FRG2CA6NGY1 282 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 RPL37AP8A6NKH3 93 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 EFCAB8A8MWE9 144 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 USP17L23D6RBM5 183 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 ACKR2O00590 384 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 ENPP3O14638 875 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 VILLO15195 856 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 GPC4O75487 556 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 CEACAM4O75871 244 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 CT47B1P0C2W7 299 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 PF4V1P10720 104 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 SLC2A2P11168 524 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 RPL17P18621 184 aaKnown RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 AOC1P19801 751 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 FGFR2P21802 821 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 RPA1P27694 616 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 BLKP51451 505 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 DHODHQ02127 395 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 CHRNDQ07001 517 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 OVGP1Q12889 678 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 KIAA0141Q14154 515 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 TMEM44Q2T9K0 475 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 BTBD16Q32M84 506 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 CCDC144BQ3MJ40 725 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 NHLRC3Q5JS37 347 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 CCDC174Q6PII3 467 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 PAPD4Q6PIY7 484 aaKnown RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZFP2Q6ZN57 461 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 DENND5BQ6ZUT9 1274 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 HMGN2P46Q86SG4 172 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 SYVN1Q86TM6 617 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 KIAA0319LQ8IZA0 1049 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 PTGR2Q8N8N7 351 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 OR52B6Q8NGF0 335 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 FAM71BQ8TC56 605 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 GATAD1Q8WUU5 269 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 RMI2Q96E14 147 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 LRGUKQ96M69 825 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 FOPNLQ96NB1 174 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 TECTBQ96PL2 329 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 HNRNPABQ99729 332 aaKnown RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 EIF2AQ9BY44 585 aaKnown RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 USP44Q9H0E7 712 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 BRD8Q9H0E9 1235 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 TTC12Q9H892 705 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 BAIAP2L1Q9UHR4 511 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 ANKRD6Q9Y2G4 727 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 SDK2Q58EX2 2172 aa-0.55□□□□□ -2.5
RNU6-478P-201ENST00000363904 DMBT1Q9UGM3 2413 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 SPATA31D1Q6ZQQ2 1576 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZSCAN5BA6NJL1 495 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 A8MX80 341 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 K7EQD1 137 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 SRPX2O60687 465 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZNF253O75346 499 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 VTNP04004 478 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 H1F0P07305 194 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 RNH1P13489 461 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ACP5P13686 325 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 HSPA4P34932 840 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 MDH2P40926 338 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 APOBEC1P41238 236 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 RIDAP52758 137 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 RPS3AP61247 264 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 CSNK2BP67870 215 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 GRIK3Q13003 919 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 NAE1Q13564 534 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 DAG1Q14118 895 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 VEPH1Q14D04 833 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 SLC18A3Q16572 532 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 LRRC24Q50LG9 513 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZNF506Q5JVG8 444 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 SH2D4BQ5SQS7 431 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 RNF220Q5VTB9 566 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 KLHDC7AQ5VTJ3 777 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ARL6IP4Q66PJ3 421 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 FAM71E1Q6IPT2 247 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 TMEM207Q6UWW9 146 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 BBS12Q6ZW61 710 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 CACNA2D4Q7Z3S7 1137 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ADGRG6Q86SQ4 1221 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 ZBTB46Q86UZ6 589 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 C1orf52Q8N6N3 182 aaKnown RBP-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 HUS1BQ8NHY5 278 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 SLC35G2Q8TBE7 412 aa-0.56□□□□□ -2.5
RNU6-478P-201ENST00000363904 PSPC1Q8WXF1 523 aaKnown RBP-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms