RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DNAJB4Q9UDY4 337 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ERVK-11Q9UQG0 969 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 HRGP04196 525 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF20P17024 532 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CPN2P22792 545 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 KIR3DL1P43629 444 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 BDH1Q02338 343 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 MRPL49Q13405 166 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 SNAP47Q5SQN1 464 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 SMARCD3Q6STE5 483 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 OR4L1Q8NH43 312 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CNDP2Q96KP4 475 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CD93Q9NPY3 652 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 SNTG2Q9NY99 539 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 TESMINQ9Y4I5 508 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 MAP4K5Q9Y4K4 846 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PRORSD1PA6NEY8 169 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 S100PP25815 95 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CTNNB1P35222 781 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 NDUFV1P49821 464 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CDH12P55289 794 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 AIMP2Q13155 320 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 C3P1Q6ZMU1 363 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 GALNT13Q8IUC8 556 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 FTMTQ8N4E7 242 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC44A1Q8WWI5 657 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 LRTM1Q9HBL6 345 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 MIOSQ9NXC5 875 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 C14orf166Q9Y224 244 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CRYZL1O95825 349 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PRNPP04156 253 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 TROAPQ12815 778 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ADGRD2Q7Z7M1 963 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PAQR7Q86WK9 346 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 DENND1CQ8IV53 801 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 EBF2Q9HAK2 575 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ACSS2Q9NR19 701 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 C13orf42A0A1B0GVH6 325 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 NME6O75414 186 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 FAM155BO75949 473 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 VNN2O95498 520 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 APOC3P02656 99 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 HOXB9P17482 250 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF143P52747 638 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 NINJ1Q92982 152 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 AARSD1Q9BTE6 412 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 TM9SF3Q9HD45 589 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 BPIFA1Q9NP55 256 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 NPEPPSL1A6NEC2 478 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 IDSP22304 550 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 IDH3AP50213 366 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 PSMA6P60900 246 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 MTFR2Q6P444 385 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 KIF18BQ86Y91 864 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ZDHHC21Q8IVQ6 265 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 POLE4Q9NR33 117 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 CDC14AQ9UNH5 594 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 TRIP11Q15643 1979 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 TVP23AA6NH52 213 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 BUD23O43709 281 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 COL6A2P12110 1019 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 INSRRP14616 1297 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF155Q12901 538 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 MFSD8Q8NHS3 518 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 NOP16Q9Y3C1 178 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 UNC13BO14795 1591 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 SMAD9O15198 467 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 BATFQ16520 125 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 UBAP2Q5T6F2 1119 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 BARD1Q99728 777 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 SMPD4Q9NXE4 827 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF726A6NNF4 738 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CYP11A1P05108 521 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 EPCAMP16422 314 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 HTR2AP28223 471 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CRHR2Q13324 411 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 UGT8Q16880 541 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 FBXO43Q4G163 708 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ZBED6CLQ96FA7 236 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC39A3Q9BRY0 314 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 C1orf109Q9NX04 203 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 BOLA2-SMG1P6H3BVE0 249 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms