RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PPM1DO15297 605 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 CD59P13987 128 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 RPA3P35244 121 aaPredicted RBP24.7■■□□□ 1.54
SSBP3-202ENST00000357475 TSNAXIP1Q2TAA8 658 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 C14orf28Q4W4Y0 310 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 ARL10Q8N8L6 244 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 TCP10LQ8TDR4 215 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 APOLD1Q96LR9 279 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 TSNARE1Q96NA8 513 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 TRIT1Q9H3H1 467 aaKnown RBP24.7■■□□□ 1.54
SSBP3-202ENST00000357475 PARVBQ9HBI1 364 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 SLC40A1Q9NP59 571 aa24.7■■□□□ 1.54
SSBP3-202ENST00000357475 OR5K4A6NMS3 321 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 UBXN8O00124 270 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 GUCA1CO95843 209 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 CATP04040 527 aaKnown RBP24.69■■□□□ 1.54
SSBP3-202ENST00000357475 GSTA1P08263 222 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 CCT5P48643 541 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 HHEXQ03014 270 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 SP140Q13342 867 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 KRT33BQ14525 404 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 ZCCHC8Q6NZY4 707 aaKnown RBP24.69■■□□□ 1.54
SSBP3-202ENST00000357475 DCUN1D3Q8IWE4 304 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 TRIM48Q8IWZ4 208 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 TBC1D21Q8IYX1 336 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 CAMK1GQ96NX5 476 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 IL17FQ96PD4 163 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 PKP4Q99569 1192 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 RNF112Q9ULX5 631 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 OARD1Q9Y530 152 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 PCDHGB2Q9Y5G2 931 aa24.69■■□□□ 1.54
SSBP3-202ENST00000357475 NCF1BA6NI72 391 aaPredicted RBP24.68■■□□□ 1.54
SSBP3-202ENST00000357475 NCF1CA8MVU1 366 aaPredicted RBP24.68■■□□□ 1.54
SSBP3-202ENST00000357475 TARM1B6A8C7 271 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 SLC16A5O15375 505 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 KERAO60938 352 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 VIPP01282 170 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 PROCP04070 461 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 ALPPL2P10696 532 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 NCF1P14598 390 aaPredicted RBP24.68■■□□□ 1.54
SSBP3-202ENST00000357475 SLC2A4P14672 509 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 GPR18Q14330 331 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.68■■□□□ 1.54
SSBP3-202ENST00000357475 KLC3Q6P597 504 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 ADAMTSL2Q86TH1 951 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 OR52E1Q8NGJ3 308 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 MENTQ9BUN1 341 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 DUSP23Q9BVJ7 150 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 XKR8Q9H6D3 395 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 MVB12BQ9H7P6 319 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 POT1Q9NUX5 634 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 HEBP2Q9Y5Z4 205 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 RNF215Q9Y6U7 377 aa24.68■■□□□ 1.54
SSBP3-202ENST00000357475 RIF1Q5UIP0 2472 aaKnown RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 CASC3O15234 703 aaKnown RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 MTHFD2P13995 350 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 RPIAP49247 311 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 TGFBIQ15582 683 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 ZXDCQ2QGD7 858 aaPredicted RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 C18orf21Q32NC0 220 aaPredicted RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 SLC9B2Q86UD5 537 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 GPSM1Q86YR5 675 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 RHEBL1Q8TAI7 183 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 STAG3L4Q8TBR4 150 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 DENND1AQ8TEH3 1009 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 ALKBH8Q96BT7 664 aaKnown RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 FAM111AQ96PZ2 611 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 SSU72Q9NP77 194 aaKnown RBP24.67■■□□□ 1.54
SSBP3-202ENST00000357475 KCNK9Q9NPC2 374 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 GRID1Q9ULK0 1009 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 PLLPQ9Y342 182 aa24.67■■□□□ 1.54
SSBP3-202ENST00000357475 HMGB1P1B2RPK0 211 aaPredicted RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 MYO1CO00159 1063 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 PLIN3O60664 434 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 CYP2A7P20853 494 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 MAP4P27816 1152 aaKnown RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 HPDP32754 393 aaPredicted RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 FASLGP48023 281 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 FBXO48Q5FWF7 155 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 FRA10AC1Q70Z53 315 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 LCA5Q86VQ0 697 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SETD7Q8WTS6 366 aaKnown RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 MRPL57Q9BQC6 102 aaKnown RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 MRPL46Q9H2W6 279 aaKnown RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 KIR3DX1Q9H7L2 352 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 ICKQ9UPZ9 632 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 COLEC10Q9Y6Z7 277 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 DMXL1Q9Y485 3027 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SUPT3HB4E1H0 165 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SH3BP5O60239 455 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SUPT3HO75486 399 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SLC16A8O95907 504 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 RBP1P09455 135 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 SUZ12Q15022 739 aaKnown RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 PROX2Q3B8N5 592 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 C2orf73Q8N5S3 287 aaPredicted RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 FAM181AQ8N9Y4 354 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 FBXO15Q8NCQ5 510 aaPredicted RBP24.66■■□□□ 1.54
SSBP3-202ENST00000357475 ARMC2Q8NEN0 867 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 TBC1D10AQ9BXI6 508 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms