RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SPIN1Q9Y657 262 aaPredicted RBP14.59□□□□□ -0.07
CHD4-201ENST00000357008 CHP2O43745 196 aa14.58□□□□□ -0.07
CHD4-201ENST00000357008 TRIM3O75382 744 aaPredicted RBP14.58□□□□□ -0.07
CHD4-201ENST00000357008 CHRM5P08912 532 aaPredicted RBP14.58□□□□□ -0.07
CHD4-201ENST00000357008 ATF4P18848 351 aaPredicted RBP14.58□□□□□ -0.07
CHD4-201ENST00000357008 CSTF2P33240 577 aaKnown RBP eCLIP14.58□□□□□ -0.07
CHD4-201ENST00000357008 NAT16Q8N8M0 369 aa14.58□□□□□ -0.07
CHD4-201ENST00000357008 PCDHA2Q9Y5H9 948 aa14.58□□□□□ -0.07
CHD4-201ENST00000357008 YES1P07947 543 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 SLC2A2P11168 524 aaPredicted RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 ACSL1P33121 698 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 CLCNKBP51801 687 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 CBLBQ13191 982 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 MOGQ16653 247 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 CES5AQ6NT32 575 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 TUBA3EQ6PEY2 450 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 FIBCD1Q8N539 461 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 C17orf50Q8WW18 174 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ACTR3BQ9P1U1 418 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 A8MT66 165 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 WRBO00258 174 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 POP4O95707 220 aaKnown RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 KCNJ11Q14654 390 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 WSCD2Q2TBF2 565 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ZFAND2BQ8WV99 257 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 AMBNQ9NP70 447 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ANXA2P07355 339 aaKnown RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 PEPDP12955 493 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ITIH1P19827 911 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ATXN1P54253 815 aaKnown RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 UBAP2Q5T6F2 1119 aaKnown RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 SLC30A6Q6NXT4 461 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ZBED6CLQ96FA7 236 aaPredicted RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 DAPL1A0PJW8 107 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 CMPK1P30085 196 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 KHKP50053 298 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 ZNF829Q3KNS6 432 aaPredicted RBP14.58□□□□□ -0.08
CHD4-201ENST00000357008 TPRG1LQ5T0D9 272 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 EPGNQ6UW88 154 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.082e-10■■■■■ 37.6
CHD4-201ENST00000357008 MYOCQ99972 504 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 TCF7L1Q9HCS4 588 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 TMLHEQ9NVH6 421 aa14.58□□□□□ -0.08
CHD4-201ENST00000357008 DNAJB1P25685 340 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PPP3R1P63098 170 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 ADAM8P78325 824 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 LINGO2Q7L985 606 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 EFHD2Q96C19 240 aaPredicted RBP14.57□□□□□ -0.08
CHD4-201ENST00000357008 SIPA1Q96FS4 1042 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 XPNPEP1Q9NQW7 623 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 YJEFN3A6XGL0 299 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PDPK1O15530 556 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PRNPP04156 253 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 EFNA1P20827 205 aaPredicted RBP14.57□□□□□ -0.08
CHD4-201ENST00000357008 IL1R2P27930 398 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 IST1P53990 364 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 GPX6P59796 221 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 DSC3Q14574 896 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SLC10A6Q3KNW5 377 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 TREML2Q5T2D2 321 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 ATXN7L2Q5T6C5 722 aaPredicted RBP14.57□□□□□ -0.08
CHD4-201ENST00000357008 IQCF2Q8IXL9 164 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 CAMK1GQ96NX5 476 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 HAPLN3Q96S86 360 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 OR51V1Q9H2C8 321 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 MFSD1Q9H3U5 465 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SLC17A6Q9P2U8 582 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 COLEC10Q9Y6Z7 277 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PLOD2O00469 737 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 OR1F1O43749 312 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SCGNO76038 276 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 IFNA7P01567 189 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 APOC1P02654 83 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SCNN1AP37088 669 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 ZCCHC12Q6PEW1 402 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 QSOX2Q6ZRP7 698 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SLC24A5Q71RS6 500 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 ERMP1Q7Z2K6 904 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 CLCC1Q96S66 551 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PCBD2Q9H0N5 130 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 FFAR2O15552 330 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 BCAS2O75934 225 aaPredicted RBP14.57□□□□□ -0.08
CHD4-201ENST00000357008 SLC15A1P46059 708 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 AP1S2P56377 157 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 KLRG1Q96E93 195 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 POFUT2Q9Y2G5 429 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SPEF1Q9Y4P9 236 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 MYBPHLA2RUH7 354 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 TPST2O60704 377 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 PRAMEF12O95522 483 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 CD2P06729 351 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 CCL23P55773 120 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 OR2T5Q6IEZ7 315 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
CHD4-201ENST00000357008 OXR1Q8N573 874 aa14.57□□□□□ -0.08
CHD4-201ENST00000357008 OR2T29Q8NH02 315 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms