RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 PPP2CAP67775 309 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 NFKB2Q00653 900 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 TMEM196Q5HYL7 178 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 KIAA1324Q6UXG2 1013 aaKnown RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 ZNF761Q86XN6 746 aaPredicted RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 PGBD3Q8N328 593 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 OR56A4Q8NGH8 313 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 TMEM159Q96B96 161 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 NUS1Q96E22 293 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PRDM6Q9NQX0 595 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 STOX2Q9P2F5 926 aaPredicted RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 FBXO10Q9UK96 956 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PRRC2CQ9Y520 2896 aaKnown RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 POM121BA6NF01 834 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 TRPC5OSA6NMA1 111 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 SYCE1LA8MT33 242 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 K7EQS6 105 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 POP7O75817 140 aaKnown RBP13.54□□□□□ -0.24
LSS-201ENST00000356396 CIB2O75838 187 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 ATP5HO75947 161 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PCNAP12004 261 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 GPX3P22352 226 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 DDX6P26196 483 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■■■■■ 46.6
LSS-201ENST00000356396 ACSL1P33121 698 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PSME3P61289 254 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 WSCD2Q2TBF2 565 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 CERS6Q6ZMG9 384 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 TECPR1Q7Z6L1 1165 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 APIPQ96GX9 242 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 TMEM245Q9H330 911 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 NMRK1Q9NWW6 199 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 RWDD3Q9Y3V2 267 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 CFAP47Q6ZTR5 3102 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PLXNB3Q9ULL4 1909 aa13.54□□□□□ -0.24
LSS-201ENST00000356396 PEX1O43933 1283 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 AK4P27144 223 aaPredicted RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 CHIT1Q13231 466 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 FLOT2Q14254 428 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 GK3PQ14409 553 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 TPRG1LQ5T0D9 272 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 LMNTD2Q8IXW0 634 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 DOK4Q8TEW6 326 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ISG20Q96AZ6 181 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 OR4K3Q96R72 315 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 CD244Q9BZW8 370 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ZNF385DQ9H6B1 395 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 C5AR2Q9P296 337 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 AURKCQ9UQB9 309 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ZNF839A8K0R7 811 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 RTCAO00442 366 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 THRAP10827 490 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 STX1BP61266 288 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ELAVL3Q14576 367 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 TMPRSS11BQ86T26 416 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 SELENOMQ8WWX9 145 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 PEX13Q92968 403 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 FEZF1A0PJY2 475 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 CHUKO15111 745 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 CASC3O15234 703 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 MAP3K13O43283 966 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ADAM23O75077 832 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 SERPIND1P05546 499 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 MAPK8P45983 427 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 NRF1Q16656 503 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 SPPL2CQ8IUH8 684 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 HMGB4Q8WW32 186 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 TPSD1Q9BZJ3 242 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 ACTL8Q9H568 366 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 THG1LQ9NWX6 298 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 ZFR2Q9UPR6 939 aaKnown RBP13.53□□□□□ -0.24
LSS-201ENST00000356396 ASF1AQ9Y294 204 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
LSS-201ENST00000356396 C2CD4DB7Z1M9 353 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 TXNDC9O14530 226 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.24
LSS-201ENST00000356396 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.24
LSS-201ENST00000356396 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.24
LSS-201ENST00000356396 EPB42P16452 691 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 HIST1H2ADP20671 130 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 GRIA3P42263 894 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 TAF11Q15544 211 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 ZRSR2Q15696 482 aaKnown RBP13.52□□□□□ -0.24
LSS-201ENST00000356396 CST6Q15828 149 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 XKR6Q5GH73 641 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 SPANXN4Q5MJ08 99 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms