RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CSF2RBP32927 897 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MAPK9P45984 424 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CAPZBP47756 277 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PREPP48147 710 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 IDH3AP50213 366 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PDX1P52945 283 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CSE1LP55060 971 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 INHBCP55103 352 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 OR1D5P58170 312 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 SLC7A5Q01650 507 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 EIF3IQ13347 325 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 SWI5Q1ZZU3 235 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 TTLL9Q3SXZ7 439 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 HSP90AA5PQ58FG0 334 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LRRC8EQ6NSJ5 796 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FAM45BPQ6NSW5 357 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 DUS1LQ6P1R4 473 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KLHL35Q6PF15 583 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 WDR74Q6RFH5 385 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 C8orf86Q6ZUL3 223 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 NEK10Q6ZWH5 1172 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PRSS42Q7Z5A4 293 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 RELL1Q8IUW5 271 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 SLITRK4Q8IW52 837 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 DENND6AQ8IWF6 608 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KRT222Q8N1A0 295 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ZBTB2Q8N680 514 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LILRA3Q8N6C8 439 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PNPLA1Q8N8W4 532 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 Q8N9G6 341 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ACVR1CQ8NER5 493 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 OR4D9Q8NGE8 314 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FAM45AQ8TCE6 357 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PYROXD1Q8WU10 500 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 NAT14Q8WUY8 206 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ASZ1Q8WWH4 475 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 AHCYL2Q96HN2 611 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 BIRC8Q96P09 236 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FMO2Q99518 471 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 STRADBQ9C0K7 418 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ABCG4Q9H172 646 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 TRIT1Q9H3H1 467 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 IMP3Q9NV31 184 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MOCS1Q9NZB8 636 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 IL1RAPL1Q9NZN1 696 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FAM8A1Q9UBU6 413 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 COLEC10Q9Y6Z7 277 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 VPS13AQ96RL7 3174 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 MYO15AQ9UKN7 3530 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TRBV23OR9-2A0A075B6M9 112 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 FAM159BA6NKW6 160 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 E5RI56 91 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 MATN2O00339 956 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 HGSO14964 777 aaPredicted RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 B4GAT1O43505 415 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 NIPSNAP2O75323 286 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 VPS26AO75436 327 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 UBXN7O94888 489 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 SLCO2B1O94956 709 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 C9P02748 559 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 ANKRD34CP0C6C1 535 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CBSLP0DN79 551 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 THRAP10827 490 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 ENO3P13929 434 aaPredicted RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 NID1P14543 1247 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 JUPP14923 745 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 ACADLP28330 430 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TNFRSF8P28908 595 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CD1CP29017 333 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CBSP35520 551 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 MAGEA4P43358 317 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 ZFP36L1Q07352 338 aaKnown RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CTBP1Q13363 440 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 GPR18Q14330 331 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 KRT33BQ14525 404 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 PLCL1Q15111 1095 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 OCLNQ16625 522 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 ISXQ2M1V0 245 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 C11orf91Q3C1V1 193 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 DNTTIP2Q5QJE6 756 aaKnown RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TEDDM1Q5T9Z0 273 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 UGT3A1Q6NUS8 523 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TMEM71Q6P5X7 295 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TRMT10BQ6PF06 316 aaKnown RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 IGF2-ASQ6U949 168 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CYS1Q717R9 158 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC25Q86WR0 208 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 OOSP2Q86WS3 158 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 DCUN1D3Q8IWE4 304 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 PALM2Q8IXS6 379 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 IFT20Q8IY31 132 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 UNC5BQ8IZJ1 945 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CARFQ8N187 725 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 EIF1ADQ8N9N8 165 aaKnown RBP3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CDKL2Q92772 493 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 GATA6Q92908 595 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC74BQ96LY2 380 aa3.86□□□□□ -1.79
CNOT4-202ENST00000356162 FOPNLQ96NB1 174 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms