RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SPIDRQ14159 915 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 GRB7Q14451 532 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 HES3Q5TGS1 186 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 DCUN1D3Q8IWE4 304 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 MYO1HQ8N1T3 1032 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 CHCHD4Q8N4Q1 142 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 C2orf73Q8N5S3 287 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 EPS8L3Q8TE67 593 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 CCDC77Q9BR77 488 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 SRMSQ9H3Y6 488 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 SNX15Q9NRS6 342 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 ZNF180Q9UJW8 692 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 FAM149AA5PLN7 773 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 TRIM49D1C9J1S8 452 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 PROS1P07225 676 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 SLC35E2BP0CK96 405 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 CCDC166P0CW27 439 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 SERPINB9P50453 376 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 EPHA4P54764 986 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 ILF2Q12905 390 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 MAP9Q49MG5 647 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 ADGRD1Q6QNK2 874 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 UBE2R2Q712K3 238 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 ZFPM2Q8WW38 1151 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 POPDC3Q9HBV1 291 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 POLG2Q9UHN1 485 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 UNC13CQ8NB66 2214 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 NPEPPSL1A6NEC2 478 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 FOXO6A8MYZ6 492 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 D6RAR5 112 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 GFYI3L273 518 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 EIF3FO00303 357 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 CDC7O00311 574 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 CTIFO43310 598 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 DUX1O43812 170 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 KRT38O76015 456 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 SYF2O95926 243 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 RPN2P04844 631 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 TYK2P29597 1187 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 GFERP55789 205 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 GPLD1P80108 840 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 IRF9Q00978 393 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 CSHL1Q14406 222 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 ZNF574Q6ZN55 896 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 B3GNT8Q7Z7M8 397 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 AMIGO1Q86WK6 493 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 MREGQ8N565 214 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 NKAPQ8N5F7 415 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 ADAMTS14Q8WXS8 1223 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 TFB2MQ9H5Q4 396 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 SYTL2Q9HCH5 934 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 HRASLS2Q9NWW9 162 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 PSMC3IPQ9P2W1 217 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 KLHL3Q9UH77 587 aa17.36■□□□□ 0.37
PDLIM7-202ENST00000355841 BTN3A3O00478 584 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 BTN3A1O00481 513 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 ZW10O43264 779 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 CPNE6O95741 557 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 CATP04040 527 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 C2P06681 752 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 POLR2CP19387 275 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 CRABP2P29373 138 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 CAPZBP47756 277 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 SERPINB8P50452 374 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 PDX1P52945 283 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 FOXC1Q12948 553 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 DLG1Q12959 904 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 PHKG1Q16816 387 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 SNAP47Q5SQN1 464 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 TTC23LQ6PF05 361 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 MBOAT1Q6ZNC8 495 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 TAOK1Q7L7X3 1001 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 TAX1BP1Q86VP1 789 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 PKP4Q99569 1192 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 MENTQ9BUN1 341 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
PDLIM7-202ENST00000355841 A0A096LPK6 155 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 HYAL3O43820 417 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 ZBTB14O43829 449 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 KRT37O76014 449 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 MT-CO3P00414 261 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 SNRPAP09012 282 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 MAP4P27816 1152 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 LRRC8EQ6NSJ5 796 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 IRGCQ6NXR0 463 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 RBM44Q6ZP01 1051 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 RASGRP3Q8IV61 690 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 DENND1AQ8TEH3 1009 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 RAD51AP1Q96B01 352 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 PDLIM5Q96HC4 596 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 UBXN10Q96LJ8 280 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 TGM7Q96PF1 710 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 VPS11Q9H270 941 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 UTP6Q9NYH9 597 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 FETUBQ9UGM5 382 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 PDE10AQ9Y233 779 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 PLAAQ9Y263 795 aa17.34■□□□□ 0.37
PDLIM7-202ENST00000355841 TLDC2A0PJX2 215 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 GSAPA4D1B5 854 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 OR5K3A6NET4 321 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms