RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 HLA-DPB1P04440 258 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 CHRM5P08912 532 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PPP3R1P63098 170 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MEP1AQ16819 746 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ANKDD1AQ495B1 522 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 AMIGO1Q86WK6 493 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 CFAP206Q8IYR0 622 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GRIN3AQ8TCU5 1115 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 DMAC2Q9NW81 257 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZSCAN5BA6NJL1 495 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ITGB5P18084 799 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 L1CAMP32004 1257 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 UGCGQ16739 394 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 FNDC3BQ53EP0 1204 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 APOBEC3HQ6NTF7 200 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 KLHL35Q6PF15 583 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ADGRD2Q7Z7M1 963 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 RANBP3LQ86VV4 465 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 DCBLD1Q8N8Z6 715 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ASF1AQ9Y294 204 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 A6NHS1 94 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CDRT1O95170 752 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ESR1P03372 595 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RHOQP17081 205 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 PSEN2P49810 448 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ARMC10Q8N2F6 343 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 THAP6Q8TBB0 222 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 FUZQ9BT04 418 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CDADC1Q9BWV3 514 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 NUDT15Q9NV35 164 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 GOT2P00505 430 aaKnown RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 HMGN1P05114 100 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC1A2P43004 574 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 S100A12P80511 92 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 OCLNQ16625 522 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 LDB1Q86U70 411 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 C7orf43Q8WVR3 580 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 IRGQQ8WZA9 623 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 C12orf71A8MTZ7 269 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RAVER1Q8IY67 606 aaKnown RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 BTN2A3PQ96KV6 586 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 TRPV4Q9HBA0 871 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RIMKLBQ9ULI2 386 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CD2P06729 351 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 MATN1P21941 496 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 SCNN1GP51170 649 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF81P51508 661 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 GPX6P59796 221 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 MOGSQ13724 837 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 MBLAC2Q68D91 279 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 BIRC7Q96CA5 298 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 MCCC1Q96RQ3 725 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 CCDC106Q9BWC9 280 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 NRCAMQ92823 1304 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 INMT-MINDY4F8WBC2 141 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ITGA10O75578 1167 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RP2O75695 350 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR7A10O76100 309 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 RB1P06400 928 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 ATP4BP51164 291 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 GBX2P52951 348 aaPredicted RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 SYVN1Q86TM6 617 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 PHC3Q8NDX5 983 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 SRFBP1Q8NEF9 429 aaKnown RBP12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 DENND6BQ8NEG7 585 aa12.49□□□□□ -0.41
SYNCRIP-201ENST00000355238 PRORSD1PA6NEY8 169 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 EPCAMP16422 314 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 GSTM3P21266 225 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CPN2P22792 545 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 FCGRTP55899 365 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 VMACQ2NL98 169 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 KIAA1614Q5VZ46 1190 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 C9orf57Q5W0N0 161 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 EEF1DP3Q658K8 133 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SCML4Q8N228 414 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 LINC00471Q8N535 108 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms