RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 GJA8P48165 433 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 CD300CQ08708 224 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SELENBP1Q13228 472 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 LAPTM5Q13571 262 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 NFE2Q16621 373 aaPredicted RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 TTLL9Q3SXZ7 439 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 UBE2UQ5VVX9 321 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 RAP1GAP2Q684P5 730 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 MSANTD1Q6ZTZ1 278 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SLC22A16Q86VW1 577 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 MDGA1Q8NFP4 955 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 RPRD1AQ96P16 312 aaPredicted RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SIGLEC11Q96RL6 698 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 YME1L1Q96TA2 773 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 CPPED1Q9BRF8 314 aaPredicted RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 AP5M1Q9H0R1 490 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 P2RY12Q9H244 342 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 LTB4R2Q9NPC1 389 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 ACOT13Q9NPJ3 140 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 TRPS1Q9UHF7 1281 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 NDRG4Q9ULP0 352 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 MRPL42Q9Y6G3 142 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 E9PQ18 207 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 INSIG1O15503 277 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 XPNPEP2O43895 674 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 NUAK1O60285 661 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CCNDBP1O95273 360 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SERPINA1P01009 418 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PFKLP17858 780 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 ACVRL1P37023 503 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 MAGEA11P43364 429 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 ALDH7A1P49419 539 aaKnown RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CLCN7P51798 805 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 KPNA1P52294 538 aaPredicted RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 FCGRTP55899 365 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 FAM174BQ3ZCQ3 159 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 TTC23LQ6PF05 361 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SNX20Q7Z614 316 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 UBTD2Q8WUN7 234 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 FAM120BQ96EK7 910 aaKnown RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CDK15Q96Q40 435 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 IPPKQ9H8X2 491 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 OR2A25A4D2G3 310 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 E5RI56 91 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 TOR1BO14657 336 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PER2O15055 1255 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 FTH1P02794 183 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PIRTP0C851 137 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 ZNF865P0CJ78 1059 aaPredicted RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CR2P20023 1033 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PRKACGP22612 351 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 DNAJA1P31689 397 aaKnown RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 MC4RP32245 332 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PCYT1AP49585 367 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CLK3P49761 638 aaKnown RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 VBP1P61758 197 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 RPL38P63173 70 aaKnown RBP11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PAGE2Q7Z2X7 111 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 CYP4Z1Q86W10 505 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PLD3Q8IV08 490 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 TMEM132CQ8N3T6 1108 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 NETO1Q8TDF5 533 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SLC38A4Q969I6 547 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 NCLNQ969V3 563 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 ESAMQ96AP7 390 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 RMDN1Q96DB5 314 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PITX2Q99697 317 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 NTMT1Q9BV86 223 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 SLC29A3Q9BZD2 475 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 IKZF5Q9H5V7 419 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 PKP3Q9Y446 797 aa11.18□□□□□ -0.62
CAPN9-202ENST00000354537 AXIN1O15169 862 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 INPPL1O15357 1258 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 GJB3O75712 270 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 PTTG1O95997 202 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 PRLP01236 227 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 MT-ND2P03891 347 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 ZNF24P17028 368 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 HOXB9P17482 250 aaPredicted RBP11.17□□□□□ -0.62
CAPN9-202ENST00000354537 FPR1P21462 350 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 MASP1P48740 699 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 EFEMP1Q12805 493 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 DNASE1L3Q13609 305 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 GBX1Q14549 363 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 MAD2L1BPQ15013 274 aaPredicted RBP11.17□□□□□ -0.62
CAPN9-202ENST00000354537 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
CAPN9-202ENST00000354537 MLIPQ5VWP3 458 aa11.17□□□□□ -0.62
CAPN9-202ENST00000354537 ANKRD34AQ69YU3 496 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms