RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RNF212Q495C1 297 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 AVPI1Q5T686 147 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZDHHC21Q8IVQ6 265 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 YIPF7Q8N8F6 280 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 RXFP2Q8WXD0 754 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NR4A3Q92570 626 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 HSPA12BQ96MM6 686 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZNF641Q96N77 438 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 RNF157Q96PX1 679 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ERVK-6Q9BXR3 956 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 DNTTIP1Q9H147 329 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 XPNPEP1Q9NQW7 623 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ERVK-18Q9QC07 812 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SPTA1P02549 2419 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 A0A087WZ62 844 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TUBAL3A6NHL2 446 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NCF1BA6NI72 391 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 NCF1CA8MVU1 366 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 E9PI62 339 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 WWP2O00308 870 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLC28A1O00337 649 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PDCD5O14737 125 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GCATO75600 419 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NCF1P14598 390 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 CPN2P22792 545 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 RFC2P35250 354 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CLK2P49760 499 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 TAS2R40P59535 323 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 HSPA14Q0VDF9 509 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TMEM164Q5U3C3 297 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PAPD4Q6PIY7 484 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 CHST15Q7LFX5 561 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 MILR1Q7Z6M3 343 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLC41A1Q8IVJ1 513 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GLB1L3Q8NCI6 653 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 TMEM209Q96SK2 561 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ALG9Q9H6U8 611 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NIT2Q9NQR4 276 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 IL37Q9NZH6 218 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 KCNIP3Q9Y2W7 256 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 LRRC14BA6NHZ5 514 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 DYNC1LI2O43237 492 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ENTPD6O75354 484 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ATP6AP2O75787 350 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CLIC3O95833 236 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TRUB2O95900 331 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 CALCAP01258 141 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 MT-ND1P03886 318 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ANXA5P08758 320 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PSMA6P60900 246 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 RPL19P84098 196 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 GPR19Q15760 415 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GRK1Q15835 563 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 BAIAP2L2Q6UXY1 529 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PARP16Q8N5Y8 322 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 Q8N9G6 341 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 BEST4Q8NFU0 473 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NDNFQ8TB73 568 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 OR52E6Q96RD3 313 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TARS2Q9BW92 718 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 C3P01024 1663 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GLYATL1P3A0A0U1RQE8 302 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CXCR6O00574 342 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 OGTO15294 1046 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CETPP11597 493 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CPB1P15086 417 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CSTF2P33240 577 aaKnown RBP eCLIP4.95□□□□□ -1.62
SKP1-202ENST00000353411 SMARCB1Q12824 385 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TDGQ13569 410 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 POU4F3Q15319 338 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 RC3H1Q5TC82 1133 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 GPRIN3Q6ZVF9 776 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SIAH1Q8IUQ4 282 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 DCP1BQ8IZD4 617 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLAIN1Q8ND83 568 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ST8SIA4Q92187 359 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ASPNQ9BXN1 380 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PTPRHQ9HD43 1115 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CISHQ9NSE2 258 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 FAM118AQ9NWS6 357 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TLR6Q9Y2C9 796 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 OR6C65A6NJZ3 312 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 STX16-NPEPL1H3BU86 382 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 AGRPO00253 132 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TNFRSF11BO00300 401 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 JRKO75564 520 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PIK3CBP42338 1070 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZNF143P52747 638 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 HLFQ16534 295 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PAN3Q58A45 887 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ANKRD22Q5VYY1 191 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 FAM117BQ6P1L5 589 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLC26A9Q7LBE3 791 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CMC1Q7Z7K0 106 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 OR7G2Q8NG99 324 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PPM1MQ96MI6 270 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZFP42Q96MM3 310 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms