RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CHD5Q8TDI0 1954 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 DYTNA2CJ06 578 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 K7EPI3 171 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 RGS14O43566 566 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 E2F6O75461 281 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 CREG1O75629 220 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 LRATO95237 230 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 BCKDHAP12694 445 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 CDKN2CP42773 168 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 ITGADQ13349 1161 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 MOGQ16653 247 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 TCTN1Q2MV58 587 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 ZNF551Q7Z340 670 aaPredicted RBP17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 FKBP10Q96AY3 582 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 EGLN2Q96KS0 407 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 CCDC138Q96M89 665 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 FEM1AQ9BSK4 669 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 TTLL2Q9BWV7 592 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 FAM126AQ9BYI3 521 aaPredicted RBP17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 LATS2Q9NRM7 1088 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 TMEM161AQ9NX61 479 aa17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 CHCHD3Q9NX63 227 aaKnown RBP17.71■□□□□ 0.42
PTP4A3-202ENST00000349124 TOR1BO14657 336 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 DIRAS1O95057 198 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 GALTP07902 379 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 HMGA1P17096 107 aaKnown RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 ISL1P61371 349 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 VAC14Q08AM6 782 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 SKIV2LQ15477 1246 aaKnown RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 ZXDCQ2QGD7 858 aaPredicted RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 ACBD5Q5T8D3 534 aaPredicted RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 TTC23Q5W5X9 447 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 SNX29P2Q8IUI4 249 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 CENPSQ8N2Z9 138 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 RNF175Q8N4F7 328 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 DDHD1Q8NEL9 900 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 PNPT1Q8TCS8 783 aaKnown RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 CCDC115Q96NT0 180 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 TSSK3Q96PN8 268 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 TTPALQ9BTX7 342 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 KAT8Q9H7Z6 458 aaKnown RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 VPS51Q9UID3 782 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 GBF1Q92538 1859 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 LOC100130705A0A1B0GUX0 176 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 GRXCR2A6NFK2 248 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 BCAS1O75363 584 aaPredicted RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 GLUD1P00367 558 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 CYP4B1P13584 511 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 ZNF7P17097 686 aaPredicted RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 IL1RL1Q01638 556 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 SLC14A1Q13336 389 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 NFATC2Q13469 925 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 GPNMBQ14956 572 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 CHRNA6Q15825 494 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 APCDD1Q8J025 514 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 MYOCQ99972 504 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 BEGAINQ9BUH8 593 aa17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 MBD1Q9UIS9 605 aaPredicted RBP17.7■□□□□ 0.42
PTP4A3-202ENST00000349124 MANBAO00462 879 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 GSTM2P28161 218 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 LSM3P62310 102 aaKnown RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 NKX3-2P78367 333 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ZXDBP98169 803 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 NR1D2Q14995 579 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 CRTC3Q6UUV7 619 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 RFLNAQ6ZTI6 216 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 TSPAN33Q86UF1 283 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 MICU2Q8IYU8 434 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 STK40Q8N2I9 435 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ZNF555Q8NEP9 628 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 HDAC2Q92769 488 aaKnown RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ULK4Q96C45 1275 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ERLEC1Q96DZ1 483 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 RHNO1Q9BSD3 238 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ACPTQ9BZG2 426 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 CLMPQ9H6B4 373 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ZFYVE1Q9HBF4 777 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 DCAF13Q9NV06 445 aaKnown RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 TMEM9Q9P0T7 183 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 TMEFF2Q9UIK5 374 aaPredicted RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 OARD1Q9Y530 152 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 NBNO60934 754 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 FTH1P02794 183 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 CSKP41240 450 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 FCGRTP55899 365 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 SIM2Q14190 667 aaPredicted RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 RBM48Q5RL73 367 aaKnown RBP17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ARMC12Q5T9G4 340 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 CES5AQ6NT32 575 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 PRR23BQ6ZRT6 265 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 SLC16A12Q6ZSM3 486 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 PYCR2Q96C36 320 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 COX4I2Q96KJ9 171 aa17.69■□□□□ 0.42
PTP4A3-202ENST00000349124 ZSCAN9O15535 394 aaPredicted RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 OCM2P0CE71 109 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 OCMP0CE72 109 aaPredicted RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 BPIP17213 487 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms