RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 HSD17B2P37059 387 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 LIMK2P53671 638 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 CDKN2DP55273 166 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 VSNL1P62760 191 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
SNCA-202ENST00000345009 PRKG2Q13237 762 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 GBX1Q14549 363 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 FAM153CQ494X1 144 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 ACSBG2Q5FVE4 666 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 RBM20Q5T481 1227 aaKnown RBP11.52□□□□□ -0.57
SNCA-202ENST00000345009 HES3Q5TGS1 186 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 USP53Q70EK8 1073 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 OOSP2Q86WS3 158 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 VRK3Q8IV63 474 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.57
SNCA-202ENST00000345009 GPR22Q99680 433 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 RAB11FIP5Q9BXF6 653 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 PARD6BQ9BYG5 372 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 TRIM54Q9BYV2 358 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 PPCSQ9HAB8 311 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNCA-202ENST00000345009 LNPEPQ9UIQ6 1025 aa11.52□□□□□ -0.57
SNCA-202ENST00000345009 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.57
SNCA-202ENST00000345009 V9GYY5 206 aaPredicted RBP11.52□□□□□ -0.57
SNCA-202ENST00000345009 FAM221BA6H8Z2 402 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 POC1B-GALNT4F8VUJ3 575 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 NTN3O00634 580 aaPredicted RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 PIAS1O75925 651 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 KRT37O76014 449 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 MATN4O95460 622 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 C8GP07360 202 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 ITGA2BP08514 1039 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 F7P08709 466 aaPredicted RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 HIST1H2AGP0C0S8 130 aaPredicted RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 TYRP1P17643 537 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 HIST1H2ADP20671 130 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 ABCG1P45844 678 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 FOXC1Q12948 553 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNCA-202ENST00000345009 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 PAQR3Q6TCH7 311 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 RAPH1Q70E73 1250 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 TMPRSS7Q7RTY8 843 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 RAB44Q7Z6P3 723 aaPredicted RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 AMIGO1Q86WK6 493 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 ZNF761Q86XN6 746 aaPredicted RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 CPNE9Q8IYJ1 553 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 CHCHD4Q8N4Q1 142 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 OR4E2Q8NGC2 313 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 OR4D9Q8NGE8 314 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 MCOLN3Q8TDD5 553 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 SLC44A1Q8WWI5 657 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 SLC22A18Q96BI1 424 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 PDLIM5Q96HC4 596 aaKnown RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 HIST1H2AHQ96KK5 128 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 HIST1H2AJQ99878 128 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 H2AFJQ9BTM1 129 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 HGH1Q9BTY7 390 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 TBC1D10AQ9BXI6 508 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 OR6C2Q9NZP2 312 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 GALPQ9UBC7 116 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 FETUBQ9UGM5 382 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 TLK1Q9UKI8 766 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 MED16Q9Y2X0 877 aa11.51□□□□□ -0.57
SNCA-202ENST00000345009 MTO1Q9Y2Z2 717 aaKnown RBP11.51□□□□□ -0.57
SNCA-202ENST00000345009 A0A1W2PQM1 296 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 ZNF839A8K0R7 811 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 D6RAR5 112 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 SLC16A5O15375 505 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 ERLIN1O75477 346 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 C1orf105O95561 183 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 C1QAP02745 245 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 MYBL2P10244 700 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 CYP2A7P20853 494 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 CAPZBP47756 277 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 RAB28P51157 221 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 TAS2R39P59534 338 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 RAB10P61026 200 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 SP140Q13342 867 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 TAF1BQ53T94 588 aaPredicted RBP11.5□□□□□ -0.57
SNCA-202ENST00000345009 MROH9Q5TGP6 573 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 CDCP2Q5VXM1 449 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 NKAIN2Q5VXU1 208 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 DUS1LQ6P1R4 473 aaKnown RBP11.5□□□□□ -0.57
SNCA-202ENST00000345009 RETREG3Q86VR2 466 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
SNCA-202ENST00000345009 DCBLD1Q8N8Z6 715 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 UHMK1Q8TAS1 419 aaKnown RBP11.5□□□□□ -0.57
SNCA-202ENST00000345009 EEF1AKMT1Q8WVE0 214 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms