RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SCUBE1Q8IWY4 988 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 DSELQ8IZU8 1212 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 RNF175Q8N4F7 328 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 MCOLN3Q8TDD5 553 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 HIST1H2AHQ96KK5 128 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 MRGPRX1Q96LB2 322 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 PKP4Q99569 1192 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 HIST1H2AJQ99878 128 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 H2AFJQ9BTM1 129 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 NTMT1Q9BV86 223 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 C1QTNF2Q9BXJ5 285 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 TRPV5Q9NQA5 729 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 L3MBTL1Q9Y468 752 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 GPR45Q9Y5Y3 372 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 CHUKO15111 745 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 SCAMP1O15126 338 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 SLC22A2O15244 555 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 SLC16A5O15375 505 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 DNTTP04053 509 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 CYP2A7P20853 494 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 ADSLP30566 484 aaPredicted RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 MSX2P35548 267 aaPredicted RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 ZFP36L2P47974 494 aaKnown RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 NEK2P51955 445 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 RAP1GDS1P52306 607 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 NAA20P61599 178 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 HMGCS1Q01581 520 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDC42-202ENST00000344548 SP140Q13342 867 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 STARD3Q14849 445 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDC42-202ENST00000344548 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 RIPOR1Q6ZS17 1223 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 Q6ZS52 159 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 Q7L0L9 218 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 C2orf42Q9NWW7 574 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
CDC42-202ENST00000344548 KLQ9UEF7 1012 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
CDC42-202ENST00000344548 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 C1orf105O95561 183 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 CD22P20273 847 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 IMPA1P29218 277 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 ACSL1P33121 698 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TRIM23P36406 574 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 CCINQ13939 588 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 KIF19Q2TAC6 998 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 DNAL1Q4LDG9 190 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 SDE2Q6IQ49 451 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 PGM2L1Q6PCE3 622 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TRMT11Q7Z4G4 463 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 CA5BQ9Y2D0 317 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 PLEKHM1Q9Y4G2 1056 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 KCNE1BA0A087WTH5 132 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3DA0A087WVF3 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3IA0A087WXS9 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3EA0A087X179 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3LB9A6J9 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 SLC31A1O15431 190 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 VEGFDO43915 354 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3HP0C7X1 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 NDUFV2P19404 249 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 DRD1P21728 446 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 ACADLP28330 430 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 HMOX2P30519 316 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 IGFALSP35858 605 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 MNAT1P51948 309 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBL3Q12788 808 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 NAE1Q13564 534 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 HERC3Q15034 1050 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 AGERQ15109 404 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3CQ6IPX1 549 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 OGFOD2Q6N063 350 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 AGTRAPQ6RW13 159 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 TBC1D3Q8IZP1 549 aaPredicted RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 RNF148Q8N7C7 305 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 PHC3Q8NDX5 983 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 OR2L2Q8NH16 312 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 SIPA1Q96FS4 1042 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 SLC17A9Q9BYT1 436 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 MMADHCQ9H3L0 296 aaPredicted RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms