RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ALPPP05187 535 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 CCT3P49368 545 aaKnown RBP14.74□□□□□ -0.05
UBE3B-202ENST00000342494 TMEM156Q8N614 296 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 LRRC17Q8N6Y2 441 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 ARL10Q8N8L6 244 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 NMUR2Q9GZQ4 415 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 ALG2Q9H553 416 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 SMURF2Q9HAU4 748 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 FANCFQ9NPI8 374 aa14.74□□□□□ -0.05
UBE3B-202ENST00000342494 PRORSD1PA6NEY8 169 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CAPN14A8MX76 684 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DNAJA2O60884 412 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 BCAP31P51572 246 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CRISP3P54108 245 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 SLC9B1Q4ZJI4 515 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 VWA5B1Q5TIE3 1220 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 METTL21CQ5VZV1 264 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 REP15Q6BDI9 236 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DEFB119Q8N690 84 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 PLA2G15Q8NCC3 412 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 RFKQ969G6 155 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 EFCAB11Q9BUY7 163 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DUSP26Q9BV47 211 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TXNRD2Q9NNW7 524 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF282Q9UDV7 671 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DUXAA6NLW8 204 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TAF4O00268 1085 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 LCN1P1Q5VSP4 162 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TNFAIP8L2Q6P589 184 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 NAPRTQ6XQN6 538 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 SLC29A4Q7RTT9 530 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 OMA1Q96E52 524 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 EBF3Q9H4W6 596 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DMAC2Q9NW81 257 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ELOA3DA6NLF2 546 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 MMP20O60882 483 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 HLA-DQB2P05538 268 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CHRNB2P17787 502 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CSNK2A2P19784 350 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 DPYSQ14117 519 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 MYLK3Q32MK0 819 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ELOA3BQ3SY89 546 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 PQLC1Q8N2U9 271 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 FAM47BQ8NA70 645 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ELOA3Q8NG57 546 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 OR2L5Q8NG80 312 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TPK1Q9H3S4 243 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 MARK1Q9P0L2 795 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 C2orf71A6NGG8 1288 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 UPK3BL1B0FP48 263 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 UPK3BL2E5RIL1 263 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 PLIN3O60664 434 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 NELFEP18615 380 aaKnown RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 SLC10A7Q0GE19 358 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TLR1Q15399 786 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 LYSMD3Q7Z3D4 306 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CCDC54Q8NEL0 328 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 OR10A6Q8NH74 314 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ADAM7Q9H2U9 754 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 MKKSQ9NPJ1 570 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ZCCHC3Q9NUD5 404 aaKnown RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 TESMINQ9Y4I5 508 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 A0A1W2PQ72 361 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF208O43345 1280 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 FAM174BQ3ZCQ3 159 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 CNTD1Q8N815 330 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 PYCR2Q96C36 320 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 IFT27Q9BW83 186 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 GATA5Q9BWX5 397 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-202ENST00000342494 COMMD4Q9H0A8 199 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 MBD2Q9UBB5 411 aa14.73□□□□□ -0.05
UBE3B-202ENST00000342494 WRBO00258 174 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 NDUFS4O43181 175 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 ERI3O43414 337 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 RPL5P46777 297 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 DCTN2Q13561 401 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CBFBQ13951 182 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 RGS21Q2M5E4 152 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 IFI44LQ53G44 452 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 TOR1AIP1Q5JTV8 583 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 PERM1Q5SV97 790 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GLB1L3Q8NCI6 653 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 LPGAT1Q92604 370 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 SLC25A36Q96CQ1 311 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 C8orf4Q9NR00 106 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 SNX7Q9UNH6 387 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CFAP20Q9Y6A4 193 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 A0A1W2PRB8 838 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF726A6NNF4 738 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 VSTM5A8MXK1 200 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GDI2P50395 445 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GPR17Q13304 367 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CHRNA6Q15825 494 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 RNASE12Q5GAN4 147 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 UBAP2Q5T6F2 1119 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 PAOXQ6QHF9 649 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 THAP5Q7Z6K1 395 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 YTHDF3Q7Z739 585 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms