RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MRPS7Q9Y2R9 242 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 MICAL3Q7RTP6 2002 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CNMDO75829 334 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CATP04040 527 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CYP11A1P05108 521 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 URODP06132 367 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 BMP2P12643 396 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC26A3P40879 764 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 BCAP31P51572 246 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CDC42P60953 191 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 FPGSQ05932 587 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CACNG1Q06432 222 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 USP45Q70EL2 814 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CLEC14AQ86T13 490 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 MYRFLQ96LU7 910 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 MUC13Q9H3R2 512 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SGK2Q9HBY8 427 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM181Q9P2C4 612 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC22A14Q9Y267 594 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 A8MV72 311 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 IL6P05231 212 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 GPX3P22352 226 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 KRT20P35900 424 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SCAPQ12770 1279 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 DTWD1Q8N5C7 304 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 MINDY1Q8N5J2 469 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ARL14EPQ8N8R7 260 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 OR4A15Q8NGL6 344 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 DCSTAMPQ9H295 470 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ATP6V1HQ9UI12 483 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC25A13Q9UJS0 675 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 KLHL20Q9Y2M5 609 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 CLIC1O00299 241 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SNX4O95219 450 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 BMP10O95393 424 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 TSPAN19P0C672 248 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ELAVL2Q12926 359 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 OR5AK3PQ8NH89 298 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 OTUB1Q96FW1 271 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC30A3Q99726 388 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 LYVE1Q9Y5Y7 322 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SLX4Q8IY92 1834 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 IFNA14P01570 189 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ENO2P09104 434 aaPredicted RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ENGP17813 658 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 HPCAL1P37235 193 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 NCS1P62166 190 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 UPP1Q16831 310 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 KLHL17Q6TDP4 642 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC24A5Q71RS6 500 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ITIH5Q86UX2 942 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 CITED4Q96RK1 184 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 FARSBQ9NSD9 589 aaKnown RBP12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 MALT1Q9UDY8 824 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 ERGIC3Q9Y282 383 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 PMF1-BGLAPU3KQ54 211 aa12.18□□□□□ -0.46
SNRNP48-201ENST00000342415 MAGEB17A8MXT2 336 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 GSRP00390 522 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 GTF2E2P29084 291 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 OR1E2P47887 323 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 SERINC3Q13530 473 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 KRR1Q13601 381 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ZBTB6Q15916 424 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 MFSD6LQ8IWD5 586 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 KBTBD8Q8NFY9 601 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ZC4H2Q9NQZ6 224 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 AIG1Q9NVV5 245 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ZIM2Q9NZV7 527 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 SPO11Q9Y5K1 396 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 A0A1B0GVM2 712 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 CENPXA8MT69 81 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 PTPN5P54829 565 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 TXNL4AP83876 142 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 CD47Q08722 323 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ATP6AP1Q15904 470 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 PM20D1Q6GTS8 502 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 PIANPQ8IYJ0 282 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 OR13J1Q8NGT2 312 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 PIH1D2Q8WWB5 315 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 C1GALT1C1Q96EU7 318 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ART5Q96L15 291 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 UROC1Q96N76 676 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 DPH2Q9BQC3 489 aaPredicted RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 NPLQ9BXD5 320 aaPredicted RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 DERL2Q9GZP9 239 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms