RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 AZIN1O14977 448 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CCDC22O60826 627 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 HOXC4P09017 264 aaPredicted RBP16.91■□□□□ 0.3
CLDN4-201ENST00000340958 EPB42P16452 691 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CXCL12P48061 93 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CCNG1P51959 295 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 ANGPT1Q15389 498 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 ZNF658BQ4V348 819 aaPredicted RBP16.91■□□□□ 0.3
CLDN4-201ENST00000340958 GPRIN3Q6ZVF9 776 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 C10orf67Q8IYJ2 551 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 OXR1Q8N573 874 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CAMKK1Q8N5S9 505 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 FRMD1Q8N878 549 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 MAGEC3Q8TD91 643 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 AGAP11Q8TF27 550 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 WDR92Q96MX6 357 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 TMEM79Q9BSE2 394 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 MYLK2Q9H1R3 596 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 KCNH6Q9H252 994 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 IPPKQ9H8X2 491 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CIDEBQ9UHD4 219 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 INVSQ9Y283 1065 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 HS3ST3A1Q9Y663 406 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 IGHV1OR15-9A0A0B4J2B8 117 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 PRSS38A1L453 326 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 SCAMP1O15126 338 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 WDR47O94967 919 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CHEK2O96017 543 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 OTCP00480 354 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 IGHV4-34P06331 123 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 RPL10P27635 214 aaKnown RBP16.91■□□□□ 0.3
CLDN4-201ENST00000340958 PIK3CGP48736 1102 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 SLC9B1Q4ZJI4 515 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 Q6ZSR6 202 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 MAML2Q8IZL2 1156 aaPredicted RBP16.91■□□□□ 0.3
CLDN4-201ENST00000340958 UBTD2Q8WUN7 234 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 CCT6BQ92526 530 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 MED8Q96G25 268 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 BMFQ96LC9 184 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 TIMM29Q9BSF4 260 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 ATG10Q9H0Y0 220 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 TCF7L2Q9NQB0 619 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 KLQ9UEF7 1012 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 ACSL5Q9ULC5 683 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 DMTF1Q9Y222 760 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 KCNK6Q9Y257 313 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 DOCK9Q9BZ29 2069 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 ANKRD12Q6UB98 2062 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 ZNF195O14628 629 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 KATNA1O75449 491 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 C1orf105O95561 183 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 ESRRBO95718 433 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 RPN2P04844 631 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 NCF2P19878 526 aaPredicted RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 EPHA3P29320 983 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 PKNOX1P55347 436 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 CORO7P57737 925 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 YPEL5P62699 121 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 PYCR3Q53H96 274 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 METRNLQ641Q3 311 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 METTL2BQ6P1Q9 378 aaKnown RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 GCNT7Q6ZNI0 430 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 PDZD3Q86UT5 571 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 MYLK4Q86YV6 388 aaPredicted RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 DDIASQ8IXT1 998 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 DEFB119Q8N690 84 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 MAPK15Q8TD08 544 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 SPACA7Q96KW9 195 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 OR2M4Q96R27 311 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 SLC32A1Q9H598 525 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 WDR55Q9H6Y2 383 aaPredicted RBP16.9■□□□□ 0.3
CLDN4-201ENST00000340958 ZBTB26Q9HCK0 441 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 FGF22Q9HCT0 170 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 TNFRSF12AQ9NP84 129 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 AASDHPPTQ9NRN7 309 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 TRIM33Q9UPN9 1127 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
CLDN4-201ENST00000340958 KRT87PA6NCN2 255 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 MAP3K13O43283 966 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 KCNJ13O60928 360 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 FUCA1P04066 466 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 IDSP22304 550 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 NUDT1P36639 197 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 RABIFP47224 123 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 CLCNKAP51800 687 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 TSTA3Q13630 321 aaPredicted RBP16.89■□□□□ 0.29
CLDN4-201ENST00000340958 KRT33BQ14525 404 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 PTCHD3Q3KNS1 767 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 UNC5DQ6UXZ4 953 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 LRRC70Q7Z2Q7 622 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 SYVN1Q86TM6 617 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 DCBLD1Q8N8Z6 715 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 OR52B6Q8NGF0 335 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 TFGQ92734 400 aaPredicted RBP16.89■□□□□ 0.29
CLDN4-201ENST00000340958 PYCR2Q96C36 320 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 FBXL8Q96CD0 374 aa16.89■□□□□ 0.29
CLDN4-201ENST00000340958 CDK15Q96Q40 435 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms