RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 OR6C2Q9NZP2 312 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 KLHL42Q9P2K6 505 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 POMT2Q9UKY4 750 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 SLC39A10Q9ULF5 831 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 ICKQ9UPZ9 632 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 CACNA1BQ00975 2339 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 PIPSLA2A3N6 862 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 C9orf172C9J069 976 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 E7ESA3 106 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 BTN3A1O00481 513 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 ZBTB11O95625 1053 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-202ENST00000340477 NELFEP18615 380 aaKnown RBP18.62■□□□□ 0.57
SYNE4-202ENST00000340477 ATP1A2P50993 1020 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 HSD11B2P80365 405 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 FRG1Q14331 258 aaKnown RBP18.62■□□□□ 0.57
SYNE4-202ENST00000340477 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 CNSTQ6PJW8 725 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 CNTN4Q8IWV2 1026 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 UNC5BQ8IZJ1 945 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 BMPERQ8N8U9 685 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 KLHL6Q8WZ60 621 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 XKR8Q9H6D3 395 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 FANCEQ9HB96 536 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 PDE7BQ9NP56 450 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 FOXJ2Q9P0K8 574 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 ZFATQ9P243 1243 aa18.62■□□□□ 0.57
SYNE4-202ENST00000340477 TRMT6Q9UJA5 497 aaKnown RBP18.62■□□□□ 0.57
SYNE4-202ENST00000340477 TSR3Q9UJK0 312 aaKnown RBP18.62■□□□□ 0.57
SYNE4-202ENST00000340477 DMXL2Q8TDJ6 3036 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 ADAMTS20P59510 1910 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 IGHV5-51A0A0C4DH38 117 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CTAGE15A4D2H0 777 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 HAUS5O94927 633 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CTAGE8P0CG41 777 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 ENO3P13929 434 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 RAB28P51157 221 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 KPNA2P52292 529 aaKnown RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 PLTPP55058 493 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 ACY1Q03154 408 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 IL11RAQ14626 422 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 GALNT7Q86SF2 657 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CTAGE6Q86UF2 777 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CTAGE4Q8IX94 777 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 SPACA3Q8IXA5 215 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 PALM2Q8IXS6 379 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 HNRNPLLQ8WVV9 542 aaKnown RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 RAD51AP1Q96B01 352 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 OR6C1Q96RD1 312 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CTRCQ99895 268 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 AARSD1Q9BTE6 412 aaKnown RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 SAYSD1Q9NPB0 183 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 LATS2Q9NRM7 1088 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 FAM114A2Q9NRY5 505 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 C1GALT1Q9NS00 363 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 SIDT1Q9NXL6 827 aaKnown RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 NSMCE4AQ9NXX6 385 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 ACTR10Q9NZ32 417 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 SEMA5BQ9P283 1151 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 CORO1CQ9ULV4 474 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-202ENST00000340477 PLAGL1Q9UM63 463 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 B3GALT1Q9Y5Z6 326 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 PKD1L2Q7Z442 2459 aa18.61■□□□□ 0.57
SYNE4-202ENST00000340477 KMT2BQ9UMN6 2715 aaPredicted RBP18.6■□□□□ 0.57
SYNE4-202ENST00000340477 BTN3A3O00478 584 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 TP73O15350 636 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 CLCN7P51798 805 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 MGAT5Q09328 741 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 TUBB3Q13509 450 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 LRRC8EQ6NSJ5 796 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 NEK10Q6ZWH5 1172 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 CCDC25Q86WR0 208 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 RASGRP3Q8IV61 690 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 INPP5DQ92835 1189 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 SLC41A2Q96JW4 573 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 PHACTR1Q9C0D0 580 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 TAS2R13Q9NYV9 303 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 GRHL1Q9NZI5 618 aa18.6■□□□□ 0.57
SYNE4-202ENST00000340477 CATP04040 527 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 F7P08709 466 aaPredicted RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CHRM5P08912 532 aaPredicted RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CBSLP0DN79 551 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 PRDX3P30048 256 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 PKLRP30613 574 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CBSP35520 551 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 SKIV2L2P42285 1042 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 RGS4P49798 205 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 TMPRSS3P57727 454 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 ILF2Q12905 390 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 KIR2DS3Q14952 304 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 FASTKD3Q14CZ7 662 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 KYNUQ16719 465 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 ZNF549Q6P9A3 640 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 SPESP1Q6UW49 350 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CEP128Q6ZU80 1094 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 ZFAND4Q86XD8 727 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 PPP1R3BQ86XI6 285 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 ADGRF3Q8IZF5 1079 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CEP112Q8N8E3 955 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 CDKL2Q92772 493 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms