RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SLC6A4P31645 630 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 OTX2P32243 289 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 IL12RB1P42701 662 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 SQLEQ14534 574 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 XAGE5Q8WWM1 108 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ESAMQ96AP7 390 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 RNF31Q96EP0 1072 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 H3BN98 237 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 DNAJC8O75937 253 aaPredicted RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 SHBGP04278 402 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 KCNJ5P48544 419 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 NIPAL1Q6NVV3 410 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 EIF1ADQ8N9N8 165 aaKnown RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 TAPBPLQ9BX59 468 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PRAMEF12O95522 483 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ALBP02768 609 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 BLVRAP53004 296 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 SCAPQ12770 1279 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 CDKN3Q16667 212 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PPM1JQ5JR12 505 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 ZNF761Q86XN6 746 aaPredicted RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 PQLC3Q8N755 202 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 MTERF1Q99551 399 aaKnown RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 RPRD1BQ9NQG5 326 aaKnown RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 CAPN8A6NHC0 703 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 REM1O75628 298 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 SERPINB3P29508 390 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
LIN54-201ENST00000340417 TFF2Q03403 129 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 MTAPQ13126 283 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 DUOXA1Q1HG43 343 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 GALNT4Q8N4A0 578 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 EBPLQ9BY08 206 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 YKT6O15498 198 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PROS1P07225 676 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 HBQ1P09105 142 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 TAS2R39P59534 338 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 AMIGO1Q86WK6 493 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 SNX32Q86XE0 403 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ADAMTS19Q8TE59 1207 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 CMKLR1Q99788 373 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PRRX2Q99811 253 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 RMI1Q9H9A7 625 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 CFL2Q9Y281 166 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 SCN4AP35499 1836 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 MAFKO60675 156 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PPIBP23284 216 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 THOC6Q86W42 341 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 TRPV3Q8NET8 790 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 RGSL1A5PLK6 1076 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 TGFB1P01137 390 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PKNOX1P55347 436 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 COX18Q8N8Q8 333 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 OR52L1Q8NGH7 329 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 CMTM7Q96FZ5 175 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 IMP4Q96G21 291 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 MATN2O00339 956 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 KCNJ13O60928 360 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 IDO1P14902 403 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 LCP2Q13094 533 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 LARS2Q15031 903 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 RFTN2Q52LD8 501 aaPredicted RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 PLEKHS1Q5SXH7 462 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 SUSD1Q6UWL2 747 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PCDHGA2Q9Y5H1 932 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 OR4F21O95013 312 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 SLC6A2P23975 617 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 ACY1Q03154 408 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 SEMA3AQ14563 771 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PRKD1Q15139 912 aaPredicted RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 CYTH1Q15438 398 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 TTC27Q6P3X3 843 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 DPP10Q8N608 796 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 LINC01465Q8N7H1 131 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 LINC01599Q8WXQ3 324 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 BIRC5O15392 142 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 FAM182AQ5T1J6 154 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 CADM2Q8N3J6 435 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms