RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 URB1O60287 2271 aaKnown RBP14.8□□□□□ -0.04
UBE3B-201ENST00000340074 TCRBV9S1A1TA0A576 114 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 CDRT15L2A8MXV6 281 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 BTN3A3O00478 584 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 VPS26AO75436 327 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 ANKRD34CP0C6C1 535 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 SEPHS1P49903 392 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 GPX6P59796 221 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 ERVPABLB-1P60509 514 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 PRKAA1Q13131 559 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 TTLL9Q3SXZ7 439 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
UBE3B-201ENST00000340074 PRSS42Q7Z5A4 293 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 DCUN1D3Q8IWE4 304 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 ADGRF3Q8IZF5 1079 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 LRRN4CLQ8ND94 238 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 INPP5DQ92835 1189 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 ZNF578Q96N58 590 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-201ENST00000340074 FOPNLQ96NB1 174 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 MAP3K3Q99759 626 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 LRRC4CQ9HCJ2 640 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 SMYD2Q9NRG4 433 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 THSD1Q9NS62 852 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 KLHL42Q9P2K6 505 aa14.8□□□□□ -0.04
UBE3B-201ENST00000340074 IGHV5-51A0A0C4DH38 117 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 GSAPA4D1B5 854 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 EFCAB7A8K855 629 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 TOX3O15405 576 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 TLX3O43711 291 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 MATN4O95460 622 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 C1orf105O95561 183 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 SHMT2P34897 504 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 MLLT3P42568 568 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 BDKRB1P46663 353 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 KPNA2P52292 529 aaKnown RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 CDKN2DP55273 166 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 ST3GAL2Q16842 350 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 UGT3A1Q6NUS8 523 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 STRA8Q7Z7C7 330 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 SLC26A11Q86WA9 606 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 CPNE9Q8IYJ1 553 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 PIAS4Q8N2W9 510 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 GPATCH11Q8N954 259 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 USP7Q93009 1102 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 PPM1MQ96MI6 270 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 CD180Q99467 661 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 MENTQ9BUN1 341 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 ZNF768Q9H5H4 540 aaKnown RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 L2HGDHQ9H9P8 463 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 TAS2R13Q9NYV9 303 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 TRMT6Q9UJA5 497 aaKnown RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 ZMIZ1Q9ULJ6 1067 aa14.79□□□□□ -0.04
UBE3B-201ENST00000340074 CORO1CQ9ULV4 474 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 ANKRD11Q6UB99 2663 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-201ENST00000340074 KRT87PA6NCN2 255 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 TLCD2A6NGC4 264 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-201ENST00000340074 MATN2O00339 956 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-201ENST00000340074 KDM1AO60341 852 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 GSTA2P09210 222 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 ECHS1P30084 290 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 SKIV2L2P42285 1042 aaKnown RBP14.78□□□□□ -0.04
UBE3B-201ENST00000340074 GRB7Q14451 532 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 KYNUQ16719 465 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 HECTD2Q5U5R9 776 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 NEK10Q6ZWH5 1172 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 CYS1Q717R9 158 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 CLEC14AQ86T13 490 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 BMPERQ8N8U9 685 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 KLHL6Q8WZ60 621 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 CDKL2Q92772 493 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 FGF11Q92914 225 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 PMEPA1Q969W9 287 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 SEMA5BQ9P283 1151 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 POMT2Q9UKY4 750 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 RAXQ9Y2V3 346 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 VWA7Q9Y334 891 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 USP24Q9UPU5 2620 aa14.78□□□□□ -0.04
UBE3B-201ENST00000340074 SPTBP11277 2137 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PIPSLA2A3N6 862 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 C2orf74A8MZ97 194 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 C9orf172C9J069 976 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PRAMEF10O60809 474 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PSIP1O75475 530 aaKnown RBP14.77□□□□□ -0.04
UBE3B-201ENST00000340074 C1QAP02745 245 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 CHRM5P08912 532 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-201ENST00000340074 RHOXF2BP0C7M4 288 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 CBSLP0DN79 551 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 MCM3P25205 808 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PRDX3P30048 256 aaKnown RBP14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PKLRP30613 574 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 SLC5A2P31639 672 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 CBSP35520 551 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 RAB28P51157 221 aa14.77□□□□□ -0.04
UBE3B-201ENST00000340074 PGGT1BP53609 377 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms