RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 STC1P52823 247 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 TPTEP56180 551 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 CYP4F8P98187 520 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 EXT2Q93063 718 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 NSUN5Q96P11 429 aaKnown RBP18.41■□□□□ 0.54
PSPC1-201ENST00000338910 MBOAT4Q96T53 435 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 TMEM106CQ9BVX2 250 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 AMBRA1Q9C0C7 1298 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 PIF1Q9H611 641 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 SIAEQ9HAT2 523 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 BPIFA1Q9NP55 256 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 INTS7Q9NVH2 962 aaKnown RBP18.41■□□□□ 0.54
PSPC1-201ENST00000338910 STOML2Q9UJZ1 356 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 FCF1Q9Y324 198 aaKnown RBP18.41■□□□□ 0.54
PSPC1-201ENST00000338910 MYO7AQ13402 2215 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 ANKRD66B4E2M5 251 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 FAM47E-STBD1D6RA91 191 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 GREM1O60565 184 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 NDUFS2O75306 463 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 FDXRP22570 491 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 RCVRNP35243 200 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 EMX2Q04743 252 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 CD47Q08722 323 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 TAF1AQ15573 450 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-201ENST00000338910 C6orf183Q5T699 404 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 GLYATQ6IB77 296 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 ZCCHC7Q8N3Z6 543 aaKnown RBP18.41■□□□□ 0.54
PSPC1-201ENST00000338910 OR7A2PQ8NGA2 310 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 BCL7BQ9BQE9 202 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 EHD1Q9H4M9 534 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 PCDH12Q9NPG4 1184 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 KLQ9UEF7 1012 aa18.41■□□□□ 0.54
PSPC1-201ENST00000338910 CARNS1A5YM72 827 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 FGBP02675 491 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ENO2P09104 434 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 GABRR2P28476 465 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 FMO4P31512 558 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 PIGAP37287 484 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ECT2LQ008S8 904 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 GRIK2Q13002 908 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 CDH18Q13634 790 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 SF3B4Q15427 424 aaKnown RBP eCLIP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ATXN7L2Q5T6C5 722 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 GAREM2Q75VX8 874 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ISG20Q96AZ6 181 aaKnown RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 LRRC3Q9BY71 257 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 AIG1Q9NVV5 245 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 PAK1IP1Q9NWT1 392 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 THG1LQ9NWX6 298 aaKnown RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 MAGEL2Q9UJ55 1249 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 LEF1Q9UJU2 399 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-201ENST00000338910 FAM50BQ9Y247 325 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 SNX5Q9Y5X3 404 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 PMF1-BGLAPU3KQ54 211 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 K7ERQ8 282 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 SLC22A1O15245 554 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 CXCL14O95715 111 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 CYBBP04839 570 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 PRR35P0CG20 571 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 RAP2AP10114 183 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 AGXTP21549 392 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 CSKP41240 450 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ADPRMQ3LIE5 342 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 NANOGNBQ7Z5D8 188 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ZDHHC13Q8IUH4 622 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 HS6ST3Q8IZP7 471 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 PJA1Q8NG27 643 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 OR6Q1Q8NGQ2 317 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 BADQ92934 168 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 NODALQ96S42 347 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 ADGRE3Q9BY15 652 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 RIMKLBQ9ULI2 386 aa18.4■□□□□ 0.54
PSPC1-201ENST00000338910 A0A1B0GTL3 188 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 CCDC154A6NI56 674 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 LSM1O15116 133 aaKnown RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 VPS4BO75351 444 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 GMNNO75496 209 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 PCNAP12004 261 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 MTHFD2P13995 350 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 CD1DP15813 335 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 GJA1P17302 382 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 OGNP20774 298 aaKnown RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 RHOAP61586 193 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 PAGE2BQ5JRK9 111 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 SPATA19Q7Z5L4 167 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 SLC22A16Q86VW1 577 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 DTWD1Q8N5C7 304 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 HJURPQ8NCD3 748 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 NDNFQ8TB73 568 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 SMURF2Q9HAU4 748 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 ZNF99A8MXY4 864 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 SLC1A7O00341 560 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 NADKO95544 446 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 CKMP06732 381 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 LPOP22079 712 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-201ENST00000338910 CASP2P42575 452 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 MTHFRP42898 656 aa18.39■□□□□ 0.53
PSPC1-201ENST00000338910 TPD52P55327 224 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms